RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 GP1BAP07359 652 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 HBQ1P09105 142 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PVRP15151 417 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 HELZP42694 1942 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDH13P55290 713 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 DCDC1P59894 354 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CYP4F2P78329 520 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 OC90Q02509 493 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ERV3-1Q14264 604 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAPRIN1Q14444 709 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAB39AQ14964 217 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 IMPG1Q17R60 797 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NXNQ6DKJ4 435 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PATL1Q86TB9 770 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZFAND4Q86XD8 727 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ESX1Q8N693 406 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 DDHD1Q8NEL9 900 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR2L2Q8NH16 312 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SUN3Q8TAQ9 357 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RHBDF1Q96CC6 855 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RMND5BQ96G75 393 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 LYSMD1Q96S90 227 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCNL2Q96S94 520 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CEP295Q9C0D2 2601 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 INTS10Q9NVR2 710 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 H7C0S8 307 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PPM1DO15297 605 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 FZD6O60353 706 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NPPAP01160 153 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SEMG1P04279 462 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC35G6P0C7Q6 338 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 MATN1P21941 496 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ITGA3P26006 1051 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 HLCSP50747 726 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLCN7P51798 805 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 VSX2P58304 361 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 IRF8Q02556 426 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKS6Q68DC2 871 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKRD26P1Q6NSI1 321 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SUSD1Q6UWL2 747 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NLRP8Q86W28 1048 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NAGSQ8N159 534 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PTGR2Q8N8N7 351 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR5AR1Q8NGP9 310 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PPP1R14BQ96C90 147 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SIGLEC11Q96RL6 698 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TUBA1CQ9BQE3 449 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RYDENQ9NUL5 291 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ACTR10Q9NZ32 417 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRPC4Q9UBN4 977 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 EPHA6Q9UF33 1036 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TAC3Q9UHF0 121 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 H0YAE9 185 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR7A17O14581 309 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 LSM1O15116 133 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SULT1C4O75897 302 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ALPPP05187 535 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 HMOX2P30519 316 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 AVPR1BP47901 424 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 LSSP48449 732 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 AGTR2P50052 363 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAB28P51157 221 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 GFERP55789 205 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 EEFSECP57772 596 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 UFM1P61960 85 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 HSD11B2P80365 405 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLCQ05315 142 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 LCP2Q13094 533 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 RPA4Q13156 261 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 DEFB109BQ30KR1 87 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PTCHD3Q3KNS1 767 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NANOGP8Q6NSW7 305 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 SPATA19Q7Z5L4 167 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPSM1Q86YR5 675 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 PIANPQ8IYJ0 282 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TBC1D21Q8IYX1 336 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 KRT78Q8N1N4 520 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 C10orf111Q8N326 155 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR52E1Q8NGJ3 308 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CD200R1Q8TD46 325 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF578Q96N58 590 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TWSG1Q9GZX9 223 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NANOGQ9H9S0 305 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 TBCCD1Q9NVR7 557 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 KLF15Q9UIH9 416 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ENTPD2Q9Y5L3 495 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 NUP210Q8TEM1 1887 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 IGHV1OR21-1A0A087WYE8 117 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 C9JVG2 144 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 BRINP1O60477 761 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAD1O60671 282 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLIC3O95833 236 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 ENO2P09104 434 aaPredicted RBP7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCL4P13236 92 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 IDO1P14902 403 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 DLSTP36957 453 aa7.05□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR4D2P58180 307 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms