RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 FAM9CQ8IZT9 166 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 FYTTD1Q96QD9 318 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 PRR14Q9BWN1 585 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 IL20RAQ9UHF4 553 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 N6AMT1Q9Y5N5 214 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 SAGE2PA6NJ88 616 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 WASHC1A8K0Z3 465 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 CHMP24386 653 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 TUBA1BP68363 451 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 ELAVL2Q12926 359 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 BAK1Q16611 211 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 SNAP47Q5SQN1 464 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 ATAD3CQ5T2N8 411 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 C22orf42Q6IC83 251 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 FAHD1Q6P587 224 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 TUBA1AQ71U36 451 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 PLPP6Q8IY26 295 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 SYNPOQ8N3V7 929 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 C1GALT1C1Q96EU7 318 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 SCRN2Q96FV2 425 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 ART5Q96L15 291 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 NMNAT1Q9HAN9 279 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 GPATCH2Q9NW75 528 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 TAS2R9Q9NYW1 312 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 STOX2Q9P2F5 926 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 GPR52Q9Y2T5 361 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 PEX16Q9Y5Y5 336 aa17.49■□□□□ 0.39
PTPRJ-202ENST00000440289 CENPXA8MT69 81 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 KPNA3O00505 521 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TLX2O43763 284 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 IDSP22304 550 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 IRF3Q14653 427 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TBCEQ15813 527 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 ARSIQ5FYB1 569 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 ZNF517Q6ZMY9 492 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 COMMD6Q7Z4G1 85 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 ABI3BPQ7Z7G0 1075 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 DDX53Q86TM3 631 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 NPAS4Q8IUM7 802 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 DIRAS2Q96HU8 199 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CEP295NLQ96MC4 621 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 COMMD3Q9UBI1 195 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 KCNE2Q9Y6J6 123 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 GON4LQ3T8J9 2241 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 GLOD5A6NK44 160 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CH25HO95992 272 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 SPINT3P49223 89 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 EPHB3P54753 998 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TLE2Q04725 743 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TARDBPQ13148 414 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■■□ 24.5
PTPRJ-202ENST00000440289 MICAQ29983 383 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 PYDC2Q56P42 97 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CLEC12AQ5QGZ9 265 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 PNCKQ6P2M8 343 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 PAMR1Q6UXH9 720 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CEACAM20Q6UY09 585 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 VASH1Q7L8A9 365 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TMEM25Q86YD3 366 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 DEPDC4Q8N2C3 294 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TMEM246Q9BRR3 403 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 RDH14Q9HBH5 336 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TMCC3Q9ULS5 477 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CCL26Q9Y258 94 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 FAM47E-STBD1D6RA91 191 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CCRL2O00421 344 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CA12O43570 354 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 SGTAO43765 313 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CATP04040 527 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 IFI30P13284 250 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CD9P21926 228 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 RNF144AP50876 292 aaPredicted RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 SNRPD2P62316 118 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 THOC7Q6I9Y2 204 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 CASP12Q6UXS9 341 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 ELMOD1Q8N336 334 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 MRPS31Q92665 395 aaKnown RBP17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 SPNS1Q9H2V7 528 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 TMEM45AQ9NWC5 275 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 POFUT2Q9Y2G5 429 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 OR51B4Q9Y5P0 310 aa17.48■□□□□ 0.39
PTPRJ-202ENST00000440289 NRG2O14511 850 aaPredicted RBP17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 IL3P08700 152 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 C5orf22Q49AR2 442 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 C22orf39Q6P5X5 142 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 BRAT1Q6PJG6 821 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 SYT14Q8NB59 555 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 RAET1EQ8TD07 263 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 XAGE5Q8WWM1 108 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 COQ8BQ96D53 544 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 ALG14Q96F25 216 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 TRMT61AQ96FX7 289 aaKnown RBP17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 VN1R3Q9BXE9 311 aa17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
PTPRJ-202ENST00000440289 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms