RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC22A11Q9NSA0 550 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TREX1Q9NSU2 369 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM248Q9NWD8 314 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARMCX1Q9P291 453 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CPSF2Q9P2I0 782 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 WNT16Q9UBV4 365 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DNAJB4Q9UDY4 337 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PCDHGB4Q9UN71 923 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 C15orf41Q9Y2V0 281 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAP2CQ9Y3L5 183 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 LRRC42Q9Y546 428 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SNX8Q9Y5X2 465 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CITO14578 2027 aa3.34□□□□□ -1.88
HMGB3P11-201ENST00000440127 COL4A4P53420 1690 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PDCD11Q14690 1871 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3DA0A087WVF3 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3IA0A087WXS9 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3EA0A087X179 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3KA0A087X1G2 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM272A0A1B0GTI8 110 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LOC285095A0A1B0GVY8 99 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3BA6NDS4 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3FA6NER0 549 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NPIPB13A6NJU9 1138 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 VGLL3A8MV65 326 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3LB9A6J9 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NPIPB4C9JG80 1138 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 F5H5T6 163 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLCO1B7G3V0H7 640 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 J3KR12 359 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RHODO00212 210 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LDLRAD4O15165 306 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC22A2O15244 555 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC7A4O43246 635 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACSL4O60488 711 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 FKBP6O75344 327 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ENTPD5O75356 428 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CNTN5O94779 1100 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 EPN2O95208 641 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIGNO95427 931 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMG1O95456 288 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 VNN2O95498 520 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 EPOP01588 193 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 IGLV3-27P01718 113 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 URODP06132 367 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LCKP06239 509 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 GALTP07902 379 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MMP2P08253 660 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 HMBSP08397 361 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 F7P08709 466 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RPSAP08865 295 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RBP1P09455 135 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZDHHC11BP0C7U3 371 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TBC1D3HP0C7X1 549 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC35E2BP0CK96 405 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TPBGLP0DKB5 382 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NR2F1P10589 423 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 THRAP10827 490 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 COX4I1P13073 169 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARSAP15289 507 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 GM2AP17900 193 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 IGFBP2P18065 325 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 AOC1P19801 751 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ARRB2P32121 409 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MAP2K2P36507 400 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATP5C1P36542 298 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SERPINB5P36952 375 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 VHLP40337 213 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PBX3P40426 434 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC26A3P40879 764 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC1A2P43004 574 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 LEPRP48357 1165 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SOX2P48431 317 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TUFMP49411 452 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CLCN5P51795 746 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MVDP53602 400 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRMT2P55345 433 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAS2R39P59534 338 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 DNAJB13P59910 316 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NANOS2P60321 138 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC34A1Q06495 639 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAF10Q12962 218 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 BTG3Q14201 252 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 NAA25Q14CX7 972 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAF11Q15544 211 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CCDC6Q16204 474 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMD5Q16401 504 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 FAM83EQ2M2I3 478 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 DEFB115Q30KQ5 88 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRMT5Q32P41 509 aaKnown RBP3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 PARP15Q460N3 678 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 C5orf22Q49AR2 442 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC9B1Q4ZJI4 515 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 CMPK2Q5EBM0 449 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 ACSBG2Q5FVE4 666 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 RABGAP1LQ5R372 815 aa3.33□□□□□ -1.88
HMGB3P11-201ENST00000440127 VWA5B1Q5TIE3 1220 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms