RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MAPKAPK3Q16644 382 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PAGE3Q5JUK9 113 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPANXN4Q5MJ08 99 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AGBL5Q8NDL9 886 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR2L8Q8NGY9 312 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DNAJB8Q8NHS0 232 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PYDC1Q8WXC3 89 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CMKLR1Q99788 373 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ACAT2Q9BWD1 397 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ASCL3Q9NQ33 180 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DMRT3Q9NQL9 472 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ADGRE2Q9UHX3 823 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ASPMQ8IZT6 3477 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PRORSD1PA6NEY8 169 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TLCD2A6NGC4 264 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC9B1P1A6NJY1 282 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NME4O00746 187 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAP3K7O43318 606 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PCDH7O60245 1069 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DNAJA2O60884 412 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CAPNS1P04632 268 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PGRP06401 933 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANKRD34CP0C6C1 535 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 JMJD7P0C870 316 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PSMB5P28074 263 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TIA1P31483 386 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 VHLP40337 213 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PIK3CBP42338 1070 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EEFSECP57772 596 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 REEP5Q00765 189 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MEF2AQ02078 507 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PGS1Q32NB8 556 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TMIGD1Q6UXZ0 262 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LRRC74BQ6ZQY2 392 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KRTCAP2Q8N6L1 136 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 C1orf52Q8N6N3 182 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 BMPERQ8N8U9 685 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TMEM125Q96AQ2 219 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TESCQ96BS2 214 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CNTNAP3BQ96NU0 1288 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR2A14Q96R47 310 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR52E6Q96RD3 313 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CTRCQ99895 268 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CNTNAP3Q9BZ76 1288 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TWSG1Q9GZX9 223 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MUC13Q9H3R2 512 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZNF768Q9H5H4 540 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 APMAPQ9HDC9 416 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SIDT1Q9NXL6 827 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FOXJ2Q9P0K8 574 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CD300AQ9UGN4 299 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KLHL20Q9Y2M5 609 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PCDHB11Q9Y5F2 797 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PCDHGA8Q9Y5G5 932 aa13.86□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANKDD1BA6NHY2 528 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 C2orf74A8MZ97 194 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ISM1B1AKI9 464 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 C9orf172C9J069 976 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SH3BGRLO75368 114 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LRATO95237 230 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 HSD17B1P14061 328 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ST6GAL1P15907 406 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PRPS1L1P21108 318 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CDH3P22223 829 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC6A2P23975 617 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MSX2P35548 267 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EIF3IQ13347 325 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ICE2Q659A1 982 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ADCK2Q7Z695 626 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC15A3Q8IY34 581 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TBC1D19Q8N5T2 526 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DNAJB14Q8TBM8 379 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZCCHC14Q8WYQ9 949 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KLHL6Q8WZ60 621 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ITCHQ96J02 903 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CD180Q99467 661 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KCTD14Q9BQ13 255 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PITHD1Q9GZP4 211 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 VCX3BQ9H321 246 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CMTM6Q9NX76 183 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AKAP7Q9P0M2 348 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SEMA5BQ9P283 1151 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AP3M1Q9Y2T2 418 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PCDHA9Q9Y5H5 950 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CROCCQ5TZA2 2017 aa13.85□□□□□ -0.19
TNFRSF1A-204ENST00000440083 GNG14A0A1W2PPG7 69 aa13.84□□□□□ -0.19
TNFRSF1A-204ENST00000440083 A0A1W2PPV9 198 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms