RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 IKZF3Q9UKT9 509 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PCDHGB1Q9Y5G3 927 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PRSS21Q9Y6M0 314 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 U3KQA8 63 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 GCN1Q92616 2671 aaKnown RBP4.56□□□□□ -1.68
EDEM3-203ENST00000439962 PLXND1Q9Y4D7 1925 aa4.56□□□□□ -1.68
EDEM3-203ENST00000439962 ATP6AP2A0A1C7CYW4 349 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GSAPA4D1B5 854 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 KLHL33A6NCF5 533 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 A8MVJ9 347 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PSMD11O00231 422 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 MANBAO00462 879 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SOCS2O14508 198 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 KLK10O43240 276 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ULK1O75385 1050 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TIPRLO75663 272 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ATP6AP2O75787 350 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CLDN9O95484 217 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 STATHP02808 62 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CAPN1P07384 714 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ABCB1P08183 1280 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CD1EP15812 388 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 HRH2P25021 359 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PTX3P26022 381 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 RYKP34925 604 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 MAGEA2P43356 314 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SLC6A12P48065 614 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 DIO3P55073 304 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 FOXL2P58012 376 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 UFM1P61960 85 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CSNK2BP67870 215 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SRSF11Q05519 484 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 DCTN2Q13561 401 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 NR6A1Q15406 480 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 AP5B1Q2VPB7 878 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PROX2Q3B8N5 592 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ARHGAP40Q5TG30 622 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GLYATQ6IB77 296 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 LETMD1Q6P1Q0 360 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF773Q6PK81 442 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 AMZ2Q86W34 360 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SPPL2CQ8IUH8 684 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TMEM132CQ8N3T6 1108 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ZCCHC7Q8N3Z6 543 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GALNT4Q8N4A0 578 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CBR4Q8N4T8 237 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 DENND6BQ8NEG7 585 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 FBLIM1Q8WUP2 373 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 RSC1A1Q92681 617 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 MOCOSQ96EN8 888 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 REXO5Q96IC2 774 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 VPS35Q96QK1 796 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SLC29A1Q99808 456 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ZSCAN5AQ9BUG6 496 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 IPPKQ9H8X2 491 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 BRF2Q9HAW0 419 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 LRTM1Q9HBL6 345 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CPNE5Q9HCH3 593 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 APMAPQ9HDC9 416 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ETAA1Q9NY74 926 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GALPQ9UBC7 116 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PPT2Q9UMR5 302 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SAMD4AQ9UPU9 718 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 NAALAD2Q9Y3Q0 740 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ANGPTL3Q9Y5C1 460 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SPTBN1Q01082 2364 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 RNF103-CHMP3A0A140T963 221 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ELOVL7A1L3X0 281 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 EME2A4GXA9 379 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PABPN1LA6NDY0 278 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CFAP99D6REC4 459 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GFYI3L273 518 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TAF4O00268 1085 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SLC16A6O15403 523 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TAPBPO15533 448 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 B4GAT1O43505 415 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 NOBOXO60393 691 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 DFNA5O60443 496 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 STK16O75716 305 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ALBP02768 609 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ALPLP05186 524 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CCDC159P0C7I6 412 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CKMT1AP12532 417 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 POLR2CP19387 275 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 TCN1P20061 433 aaPredicted RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CYP2A7P20853 494 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 RPL3P39023 403 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CASP2P42575 452 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 GSTM5P46439 218 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 RPIAP49247 311 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ARSFP54793 590 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 SLC9A5Q14940 896 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 MAPKAPK3Q16644 382 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 DEFB110Q30KQ9 67 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 CYBRD1Q53TN4 286 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PAGE3Q5JUK9 113 aa4.55□□□□□ -1.68
EDEM3-203ENST00000439962 PIWIL3Q7Z3Z3 882 aaKnown RBP4.55□□□□□ -1.68
EDEM3-203ENST00000439962 ARHGAP22Q7Z5H3 698 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms