RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 METTL2BQ6P1Q9 378 aaKnown RBP22.56■■□□□ 1.2
CPNE1-217ENST00000439669 TIFABQ6ZNK6 161 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 CISD2Q8N5K1 135 aaKnown RBP22.56■■□□□ 1.2
CPNE1-217ENST00000439669 FAM47BQ8NA70 645 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 HUS1BQ8NHY5 278 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 ADAMTS18Q8TE60 1221 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 UBLCP1Q8WVY7 318 aaPredicted RBP22.56■■□□□ 1.2
CPNE1-217ENST00000439669 ATP6V1E2Q96A05 226 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 CCDC77Q9BR77 488 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 ROGDIQ9GZN7 287 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 KCNK13Q9HB14 408 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 PLA2G3Q9NZ20 509 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 ADGRE2Q9UHX3 823 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 MMACHCQ9Y4U1 282 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 PCDHGA11Q9Y5H2 935 aa22.56■■□□□ 1.2
CPNE1-217ENST00000439669 NBASA2RRP1 2371 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 STX16-NPEPL1H3BU86 382 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 STX16O14662 325 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 UGDHO60701 494 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 PHEXP78562 749 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 ZNF33BQ06732 778 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 ZNF169Q14929 603 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-217ENST00000439669 TLR1Q15399 786 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 CHSY3Q70JA7 882 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 M1APQ8TC57 530 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 REPS1Q96D71 796 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 CMTM7Q96FZ5 175 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 TBCDQ9BTW9 1192 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 OR51B5Q9H339 312 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 NOL11Q9H8H0 719 aaKnown RBP22.55■■□□□ 1.2
CPNE1-217ENST00000439669 NECTIN3Q9NQS3 549 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 PRTFDC1Q9NRG1 225 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 FETUBQ9UGM5 382 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 TBK1Q9UHD2 729 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 TEKT2Q9UIF3 430 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 MRPS33Q9Y291 106 aaKnown RBP22.55■■□□□ 1.2
CPNE1-217ENST00000439669 PCDHGA10Q9Y5H3 936 aa22.55■■□□□ 1.2
CPNE1-217ENST00000439669 IGKV3D-11A0A0A0MRZ8 115 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 SAP18O00422 153 aaKnown RBP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 RTCAO00442 366 aaKnown RBP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 CLDN4O14493 209 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 F10P00742 488 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 SSR2P43308 183 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 RAP1GDS1P52306 607 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 LIM2P55344 173 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 SLC26A5P58743 744 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 RCN2Q14257 317 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 CPSF6Q16630 551 aaKnown RBP eCLIP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 KHDRBS2Q5VWX1 349 aaKnown RBP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 UBE3DQ7Z6J8 389 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 RNF175Q8N4F7 328 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 CATSPER1Q8NEC5 780 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 SNRNP40Q96DI7 357 aaKnown RBP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 MTERF1Q99551 399 aaKnown RBP22.54■■□□□ 1.2
CPNE1-217ENST00000439669 CENPKQ9BS16 269 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 MMP25Q9NPA2 562 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 DMRT3Q9NQL9 472 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 PRDM7Q9NQW5 492 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 DAPP1Q9UN19 280 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 RNF11Q9Y3C5 154 aa22.54■■□□□ 1.2
CPNE1-217ENST00000439669 TCRBV16S1A1N1A0A5B0 115 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 A8MUA0 341 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 GOLGA8RI6L899 631 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 TNFRSF8P28908 595 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 PIK3CBP42338 1070 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 CCNG1P51959 295 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 SLC13A2Q13183 592 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 AP5B1Q2VPB7 878 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 FCRLBQ6BAA4 426 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 ZNF793Q6ZN11 406 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 GALNT11Q8NCW6 608 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 C19orf60Q96EN9 201 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 NSUN5Q96P11 429 aaKnown RBP22.53■■□□□ 1.2
CPNE1-217ENST00000439669 CDK15Q96Q40 435 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 CSF3RQ99062 836 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 SLC29A3Q9BZD2 475 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 PCTPQ9UKL6 214 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 CNTRLQ7Z7A1 2325 aa22.53■■□□□ 1.2
CPNE1-217ENST00000439669 H0YIV9 168 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 OR7A17O14581 309 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 CLDN9O95484 217 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 WDPCPO95876 746 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 ATP5A1P25705 553 aaKnown RBP22.52■■□□□ 1.2
CPNE1-217ENST00000439669 HNRNPFP52597 415 aaKnown RBP22.52■■□□□ 1.2
CPNE1-217ENST00000439669 TAS2R50P59544 299 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 SCUBE1Q8IWY4 988 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 ZNF595Q8IYB9 648 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 ACOT4Q8N9L9 421 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 L3MBTL4Q8NA19 623 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 TMEM52Q8NDY8 209 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 OR52B6Q8NGF0 335 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 OR1N1Q8NGS0 311 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.52■■□□□ 1.25e-12■■■■□ 21.5
CPNE1-217ENST00000439669 ASF1BQ9NVP2 202 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 STMN3Q9NZ72 180 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 TMEM216Q9P0N5 145 aa22.52■■□□□ 1.2
CPNE1-217ENST00000439669 COPG1Q9Y678 874 aaKnown RBP22.52■■□□□ 1.2
CPNE1-217ENST00000439669 SAGE2PA6NJ88 616 aa22.51■■□□□ 1.19
CPNE1-217ENST00000439669 A8MT66 165 aa22.51■■□□□ 1.19
CPNE1-217ENST00000439669 TAC1P20366 129 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms