RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 ADAMTS19Q8TE59 1207 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 GEMIN6Q8WXD5 167 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 ELMO1Q92556 727 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 ECHDC3Q96DC8 303 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 TRMT2BQ96GJ1 504 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 TAS2R9Q9NYW1 312 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 J3KTA2 159 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 KPNA5O15131 536 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 RHAGQ02094 409 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 PLD1Q13393 1074 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 CRB2Q5IJ48 1285 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 USP45Q70EL2 814 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 METTL3Q86U44 580 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 OR8H2Q8N162 312 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 OR2AP1Q8NGE2 309 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 WDR36Q8NI36 951 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 CLP1Q92989 425 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 BARHL1Q9BZE3 327 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 HHATLQ9HCP6 504 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 FZD3Q9NPG1 666 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 CLN6Q9NWW5 311 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 ATP6V1HQ9UI12 483 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 LSM2Q9Y333 95 aaKnown RBP14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 PCDHB7Q9Y5E2 793 aa14.62□□□□□ -0.07
CDC42EP4-202ENST00000439510 SLC35F4A4IF30 521 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 MGAT4DA6NG13 374 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 A6NL46 340 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 CXCR2P25025 360 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 HBA1P69905 142 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ZNF385BQ569K4 471 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ZDHHC20Q5W0Z9 365 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 KLHL17Q6TDP4 642 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 SERPINA13PQ6UXR4 307 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 GDPGP1Q6ZNW5 385 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 PTCHD4Q6ZW05 846 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 VN1R5Q7Z5H4 357 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 FAM217AQ8IXS0 508 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 KLHDC8AQ8IYD2 350 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 NFKBIDQ8NI38 313 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ASB15Q8WXK1 588 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 BHMTQ93088 406 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ARMC5Q96C12 935 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 WDFY2Q96P53 400 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 NEDD4LQ96PU5 975 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ASPNQ9BXN1 380 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 NDEL1Q9GZM8 345 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 SGK2Q9HBY8 427 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 SLC25A19Q9HC21 320 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 SH3BP4Q9P0V3 963 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 CEP290O15078 2479 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 GSTM1P09488 218 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 POU2F1P14859 743 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 TIA1P31483 386 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 RPS19P39019 145 aaKnown RBP14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ADNP2Q6IQ32 1131 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ANGPTL8Q6UXH0 198 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 VASH1Q7L8A9 365 aaPredicted RBP14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ASCC1Q8N9N2 400 aaKnown RBP14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 GTPBP3Q969Y2 492 aaKnown RBP14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 TMEM175Q9BSA9 504 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 C1GALT1Q9NS00 363 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 ABCB8Q9NUT2 735 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 DSPPQ9NZW4 1301 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 PCM1Q15154 2024 aa14.61□□□□□ -0.07
CDC42EP4-202ENST00000439510 AP3D1O14617 1153 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 TRAPPC2P0DI81 140 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 TRAPPC2BP0DI82 140 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 CRISP1P54107 249 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 CDK10Q15131 360 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 ZNF79Q15937 498 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 ZFP69Q49AA0 526 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 FRMPD2BQ6IN97 320 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 RAB43Q86YS6 212 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 AQP11Q8NBQ7 271 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 OR4K3Q96R72 315 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 SLC35A5Q9BS91 424 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 RACGAP1Q9H0H5 632 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 MUTYHQ9UIF7 546 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 SLCO2B1O94956 709 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 MFN2O95140 757 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 GADD45GO95257 159 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 CNR2P34972 360 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 ZNF770Q6IQ21 691 aaPredicted RBP14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 OXR1Q8N573 874 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 SLC22A12Q96S37 553 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 CNPPD1Q9BV87 410 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 BRD9Q9H8M2 597 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 ENPP4Q9Y6X5 453 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 OBSL1O75147 1896 aa14.6□□□□□ -0.07
CDC42EP4-202ENST00000439510 PRAMEF33A0A0G2JMD5 474 aa14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 ARHGEF33A8MVX0 844 aa14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 PRAMEF10O60809 474 aa14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 PSIP1O75475 530 aaKnown RBP14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 SPINT3P49223 89 aa14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 CASP9P55211 416 aa14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 PCBP3P57721 371 aaKnown RBP14.59□□□□□ -0.07
CDC42EP4-202ENST00000439510 GATAD2AQ86YP4 633 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms