RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EIF4HQ15056 248 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 C10orf62Q5T681 223 aaPredicted RBP15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 HENMT1Q5T8I9 393 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 STEAP3Q658P3 488 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 PNCKQ6P2M8 343 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 SLCO4C1Q6ZQN7 724 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 Q6ZVL8 140 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF605Q86T29 641 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 RAVER1Q8IY67 606 aaKnown RBP15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 TMEM159Q96B96 161 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 ERLEC1Q96DZ1 483 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 C6orf62Q9GZU0 229 aaPredicted RBP15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 TMEM38AQ9H6F2 299 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 PRDM8Q9NQV8 689 aa15.71■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC5A10A0PJK1 596 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 TBX1O43435 398 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 SRPRAP08240 638 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 ETV3P41162 512 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 LIMS1P48059 325 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 CTSCP53634 463 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 PRKCDQ05655 676 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF763Q0D2J5 394 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 TPRG1LQ5T0D9 272 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 MED27Q6P2C8 311 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 ANGPTL8Q6UXH0 198 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 LILRA3Q8N6C8 439 aaPredicted RBP15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 OR4K1Q8NGD4 311 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 OR2A12Q8NGT7 310 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 OR52J3Q8NH60 311 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 NFKBIDQ8NI38 313 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 ING5Q8WYH8 240 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC35B4Q969S0 331 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 ZSWIM3Q96MP5 696 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC35A5Q9BS91 424 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 RIOK2Q9BVS4 552 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 KLHL25Q9H0H3 589 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC28A3Q9HAS3 691 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 TDP1Q9NUW8 608 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 C2orf16Q68DN1 1984 aa15.7■□□□□ 0.1
CLCNKA-203ENST00000439316 HTR3EA5X5Y0 456 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 C6orf47O95873 294 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ITGA2P17301 1181 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 OR1E2P47887 323 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 PRLHRP49683 370 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF45Q02386 682 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 SELENBP1Q13228 472 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 PDE7AQ13946 482 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 DUSP6Q16828 381 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 TOR1AIP1Q5JTV8 583 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 TMC5Q6UXY8 1006 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 STX19Q8N4C7 294 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 OXR1Q8N573 874 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 RASGEF1AQ8N9B8 481 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 NEIL2Q969S2 332 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 CRELD1Q96HD1 420 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 CCM2Q9BSQ5 444 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ZSCAN5AQ9BUG6 496 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 OR51E2Q9H255 320 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 C1GALT1Q9NS00 363 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 RFXAPO00287 272 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ATG13O75143 517 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 CEBPBP17676 345 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 MAPK9P45984 424 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 XCR1P46094 333 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 RGS6P49758 472 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 CASP9P55211 416 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 OLR1P78380 273 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ST3GAL4Q11206 333 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 RAB30Q15771 203 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ARMCX4Q5H9R4 360 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 CRB2Q5IJ48 1285 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF367Q7RTV3 350 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 TMPRSS11BQ86T26 416 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 OR9Q2Q8NGE9 314 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 BTN2A2Q8WVV5 523 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 GEMIN6Q8WXD5 167 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 REPS1Q96D71 796 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 TXNDC15Q96J42 360 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 EHD1Q9H4M9 534 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 DUSP12Q9UNI6 340 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 MRPS23Q9Y3D9 190 aaKnown RBP15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 KCNE2Q9Y6J6 123 aa15.69■□□□□ 0.1
CLCNKA-203ENST00000439316 LOC100506127A0A0U1RQW1 187 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 TSPAN11A1L157 253 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 PTTG1O95997 202 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 FURINP09958 794 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 PABPC1P11940 636 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 CBLP22681 906 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 MPEG1Q2M385 716 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 ARMCX6Q7L4S7 300 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 COMMD6Q7Z4G1 85 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 PARP16Q8N5Y8 322 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 SCAIQ8N9R8 606 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 POC5Q8NA72 575 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 VN1R2Q8NFZ6 395 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 C9orf43Q8TAL5 461 aaPredicted RBP15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 UTP15Q8TED0 518 aaKnown RBP15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 HTRA1Q92743 480 aa15.68■□□□□ 0.1
CLCNKA-203ENST00000439316 WDR34Q96EX3 536 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms