RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TFGQ92734 400 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 EPYCQ99645 322 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 RBM38Q9H0Z9 239 aaKnown RBP6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 GRIP1Q9Y3R0 1128 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 ENPP4Q9Y6X5 453 aa6.43□□□□□ -1.38
CSDE1-205ENST00000438362 SHROOM3Q8TF72 1996 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SMIM30A4D0T7 59 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 NPIPB15A6NHN6 443 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 AGAP5A6NIR3 686 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 E7EQ34 232 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 LEFTY2O00292 366 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SLC16A6O15403 523 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 AOC2O75106 756 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 PCCBP05166 539 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RB1P06400 928 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 IL3P08700 152 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CSNK2A2P19784 350 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TACR1P25103 407 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 C21orf33P30042 268 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 GGT2P36268 569 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 AVPR1BP47901 424 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ARL4DP49703 201 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CCR4P51679 360 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 HNRNPA0Q13151 305 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 EIF4HQ15056 248 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 PTPRRQ15256 657 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 IDNKQ5T6J7 187 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 LIPKQ5VXJ0 399 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 AFMIDQ63HM1 303 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SYCE2Q6PIF2 218 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TRAM1L1Q8N609 369 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF655Q8N720 491 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 FAM86B1Q8N7N1 296 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SMPDL3AQ92484 453 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RPL3LQ92901 407 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 KATNBL1Q9H079 304 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RACGAP1Q9H0H5 632 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 LMAN2LQ9H0V9 348 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ZBTB20Q9HC78 741 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 KLHL42Q9P2K6 505 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 GJD2Q9UKL4 321 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 PRAMEF33A0A0G2JMD5 474 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RIIAD1A6NNX1 92 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 A8MV72 311 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 H7C0S8 307 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 FAAHO00519 579 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CAPN5O15484 640 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR10H2O60403 315 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 UGDHO60701 494 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 PRAMEF10O60809 474 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 GABARAPO95166 117 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CPNE6O95741 557 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 FUCA1P04066 466 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 EPHX1P07099 455 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TYRP14679 529 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CNR2P34972 360 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 PCGF2P35227 344 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 NKX2-5P52952 324 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CDH11P55287 796 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CSTF1Q05048 431 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SUZ12Q15022 739 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF648Q5T619 568 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 GRHL2Q6ISB3 625 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SMARCD3Q6STE5 483 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 C17orf99Q6UX52 265 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ASCC1Q8N9N2 400 aaKnown RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR7G3Q8NG95 312 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR10H4Q8NGA5 316 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR5P2Q8WZ92 322 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 EFHD2Q96C19 240 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF300Q96RE9 604 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CCDC32Q9BV29 185 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 OR51V1Q9H2C8 321 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TMEM27Q9HBJ8 222 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 AKAP7Q9P0M2 348 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SRRDQ9UH36 339 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 BTNL2Q9UIR0 455 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 A0A1W2PQ45 241 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 A0A1W2PQY0 241 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 DAPL1A0PJW8 107 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 UBE2QL1A1L167 161 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CLDN24A6NM45 220 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CACNB4O00305 520 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 LEFTY1O75610 366 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 NFATC1O95644 943 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RAB36O95755 333 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 SLC16A8O95907 504 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ACADMP11310 421 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CD9P21926 228 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 CCR7P32248 378 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 RCVRNP35243 200 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 ARPC4P59998 168 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TBPL1P62380 186 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 GSTM4Q03013 218 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-205ENST00000438362 MICAQ29983 383 aa6.42□□□□□ -1.38
CSDE1-205ENST00000438362 TRIM71Q2Q1W2 868 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms