RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 C15orf40Q8WUR7 153 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 JPH3Q8WXH2 748 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 SMURF1Q9HCE7 757 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 HHATLQ9HCP6 504 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 SOX4Q06945 474 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TRAM2Q15035 370 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 PLD6Q8N2A8 252 aaKnown RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 MFSD2AQ8NA29 543 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 MCHR1Q99705 422 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 FBRSQ9HAH7 460 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 RARRES3Q9UL19 164 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TGM5O43548 720 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TIMP1P01033 207 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 GABRA3P34903 492 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 CBLBQ13191 982 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 PYHIN1Q6K0P9 492 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 RNF111Q6ZNA4 994 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 PDSS2Q86YH6 399 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TTYH1Q9H313 450 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 PPP4R1LQ9P1A2 415 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 LAMP5Q9UJQ1 280 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 H0YJX3 145 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 MATN2O00339 956 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 CBLP22681 906 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 CDH11P55287 796 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 PLCXD2Q0VAA5 305 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 GALNT15Q8N3T1 639 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZNF565Q8N9K5 539 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 LMO3Q8TAP4 145 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TTYH2Q9BSA4 534 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 GIMAP2Q9UG22 337 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 H3BSA7 217 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 HSPA12AO43301 675 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 FOXK1P85037 733 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 BBS10Q8TAM1 723 aa17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 TSACCQ96A04 125 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF28-204ENST00000437974 KDM4BO94953 1096 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 IFNA21P01568 189 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 VIPR2P41587 438 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZNF84P51523 738 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 PRKCDQ05655 676 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZNF782Q6ZMW2 699 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 TMCO6Q96DC7 493 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 DMRTB1Q96MA1 342 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 POLDIP3Q9BY77 421 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 VILLO15195 856 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 SCO2O43819 266 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 CTBP2P56545 445 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ARPC4P59998 168 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 MAD2L1BPQ15013 274 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 C4orf46Q504U0 113 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 PRAMEF17Q5VTA0 474 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 OR10Q1Q8NGQ4 319 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 GNPDA2Q8TDQ7 276 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 OSTF1Q92882 214 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 PLEKHA6Q9Y2H5 1048 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RNH1P13489 461 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 FPR1P21462 350 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RAB28P51157 221 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RPS15AP62244 130 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 SFT2D3Q587I9 215 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZNF542PQ5EBM4 170 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 PLXDC1Q8IUK5 500 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 CSNK1A1LQ8N752 337 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 OR5P2Q8WZ92 322 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 GAL3ST3Q96A11 431 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 BRF2Q9HAW0 419 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 CCDC59Q9P031 241 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ADAM17P78536 824 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RPL19P84098 196 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZBED5Q49AG3 693 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ERI1Q8IV48 349 aaKnown RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 THAP3Q8WTV1 239 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 RAB8BQ92930 207 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 BIRC7Q96CA5 298 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 TRIB3Q96RU7 358 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 LOC100130705A0A1B0GUX0 176 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 MYADML2A6NDP7 307 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 CYBRD1Q53TN4 286 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 USP53Q70EK8 1073 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 ZNF227Q86WZ6 799 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 GATSQ8NAP1 163 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 FAM3CQ92520 227 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 TPSD1Q9BZJ3 242 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 OARD1Q9Y530 152 aa17.59■□□□□ 0.41
ARHGEF28-204ENST00000437974 TLX2O43763 284 aaPredicted RBP17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 FGF3P11487 239 aaPredicted RBP17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 TCEAL1Q15170 157 aa17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 HSPBAP1Q96EW2 488 aa17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 ACTR3BQ9P1U1 418 aa17.58■□□□□ 0.41
ARHGEF28-204ENST00000437974 CIB4A0PJX0 185 aa17.58■□□□□ 0.4
ARHGEF28-204ENST00000437974 SLC22A1O15245 554 aa17.58■□□□□ 0.4
ARHGEF28-204ENST00000437974 ACOX3O15254 700 aa17.58■□□□□ 0.4
ARHGEF28-204ENST00000437974 TYROBPO43914 113 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms