RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	TP53BP1	Q12888	1972 aa	Predicted RBP	5.94	□□□□□ -1.46
ECHDC1-208	ENST00000436638	LRP4	O75096	1905 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	BDP1	A6H8Y1	2624 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638		A0A1W2PPH5	198 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	NCF1B	A6NI72	391 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	LILRA5	A6NI73	299 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	NCF1C	A8MVU1	366 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	HSBP1L1	C9JCN9	74 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GOLGA8R	I6L899	631 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PPM1D	O15297	605 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	DUX1	O43812	170 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PEX1	O43933	1283 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PSIP1	O75475	530 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	MATN4	O95460	622 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	C1orf105	O95561	183 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RPLP0	P05388	317 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	C2	P06681	752 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GP1BA	P07359	652 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ANXA5	P08758	320 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RBP1	P09455	135 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CEACAM1	P13688	526 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ANXA8	P13928	327 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RHCE	P18577	417 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	EEF1D	P29692	281 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TTK	P33981	857 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SLC26A3	P40879	764 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GDI2	P50395	445 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	POLR2G	P62487	172 aa	Known RBP eCLIP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CYP4F2	P78329	520 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	S100A12	P80511	92 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SIM1	P81133	766 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RHD	Q02161	417 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CYP4F3	Q08477	520 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	KCNAB2	Q13303	367 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RIPK1	Q13546	671 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TSTA3	Q13630	321 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SPIDR	Q14159	915 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GPR18	Q14330	331 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	BCL2A1	Q16548	175 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	FAM83E	Q2M2I3	478 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	AMZ1	Q400G9	498 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ZNF658B	Q4V348	819 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ANXA8L1	Q5VT79	327 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CYHR1	Q6ZMK1	362 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	MEX3B	Q6ZN04	569 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TIFAB	Q6ZNK6	161 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GLRX5	Q86SX6	157 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PIP4P1	Q86T03	277 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ADAMTSL2	Q86TH1	951 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	AMIGO1	Q86WK6	493 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	C17orf82	Q86X59	251 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ZNF761	Q86XN6	746 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SFTPA2	Q8IWL1	248 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CADM3	Q8N126	398 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR4E2	Q8NGC2	313 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR52E1	Q8NGJ3	308 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR5AR1	Q8NGP9	310 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR9A1P	Q8NGU1	263 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR5K2	Q8NHB8	316 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	STAG3L4	Q8TBR4	150 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	KCTD4	Q8WVF5	259 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ATL1	Q8WXF7	558 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	NXNL1	Q96CM4	212 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PDLIM5	Q96HC4	596 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	KIRREL1	Q96J84	757 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	DACH2	Q96NX9	599 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ZIM3	Q96PE6	472 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	EGFL8	Q99944	293 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	DPYSL5	Q9BPU6	564 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CCDC3	Q9BQI4	270 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	MCMBP	Q9BTE3	642 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	MENT	Q9BUN1	341 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	C9orf16	Q9BUW7	83 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TMEM109	Q9BVC6	243 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TRIM2	Q9C040	744 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	DERL2	Q9GZP9	239 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	LRRN3	Q9H3W5	708 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	KIR3DX1	Q9H7L2	352 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	TCF7L1	Q9HCS4	588 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SLC40A1	Q9NP59	571 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	OR6C2	Q9NZP2	312 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	AKAP7	Q9P0M2	348 aa	Predicted RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	CD300A	Q9UGN4	299 aa		5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	RUVBL2	Q9Y230	463 aa	Known RBP	5.93	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PRAMEF33	A0A0G2JMD5	474 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	LOC105371267	A0A1B0GV96	52 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SPAAR	A0A1B0GVQ0	90 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638		A0A1B0GWJ7	208 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PIPSL	A2A3N6	862 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	GSAP	A4D1B5	854 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SH3D21	A4FU49	640 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	NPEPPSL1	A6NEC2	478 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	PGPEP1L	A6NFU8	196 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SYCE1L	A8MT33	242 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ARHGEF33	A8MVX0	844 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	C2orf74	A8MZ97	194 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	ISM1	B1AKI9	464 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	SUPT3H	B4E1H0	165 aa		5.92	□□□□□ -1.46
ECHDC1-208	ENST00000436638	MATN2	O00339	956 aa		5.92	□□□□□ -1.46

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