RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PEX13Q92968 403 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 SEC16BQ96JE7 1060 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 GBP4Q96PP9 640 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 PANX2Q96RD6 677 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 EBNA1BP2Q99848 306 aaKnown RBP7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 SARGQ9BW04 601 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 ACAT2Q9BWD1 397 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 CDCP1Q9H5V8 836 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 ERVK13-1Q9NX77 482 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 ANAPC5Q9UJX4 755 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 L3MBTL1Q9Y468 752 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 NFS1Q9Y697 457 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 ROS1P08922 2347 aa7.86□□□□□ -1.15
NIF3L1-208ENST00000436412 KCNE1BA0A087WTH5 132 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 IGKV1-8A0A0C4DH67 115 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 A0A0U1RQJ8 604 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ERI2A8K979 691 aaKnown RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 IQCF5A8MTL0 148 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 FAM171A2A8MVW0 826 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PJA2O43164 708 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PROM1O43490 865 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 MATN4O95460 622 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 TFEBP19484 476 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 RPS3P23396 243 aaKnown RBP eCLIP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ADRA1DP25100 572 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ATP5DP30049 168 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 BCL6P41182 706 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 CETN2P41208 172 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 MEOX1P50221 254 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 DGKQP52824 942 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 YBX1P67809 324 aaKnown RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PRAMEP78395 509 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PMPCAQ10713 525 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 CDH17Q12864 832 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 TRIM14Q14142 442 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ABRAXAS2Q15018 415 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 NSDHLQ15738 373 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 SKOR2Q2VWA4 1001 aaPredicted RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 CCSMST1Q4G0I0 132 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 CMPK2Q5EBM0 449 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 TSTD2Q5T7W7 516 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PTRHD1Q6GMV3 140 aaKnown RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ARSKQ6UWY0 536 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ZNF534Q76KX8 674 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 CCDC71Q8IV32 467 aaPredicted RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 KRT222Q8N1A0 295 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 MPP5Q8N3R9 675 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ZFP62Q8NB50 900 aaPredicted RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 OR9A4Q8NGU2 314 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 GOT1L1Q8NHS2 421 aaPredicted RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 SPATA3Q8NHX4 192 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 ELP5Q8TE02 316 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 C18orf12Q96KH6 178 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 OR1F2PQ96R84 312 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 OSBPL8Q9BZF1 889 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 FAM129AQ9BZQ8 928 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 NHEJ1Q9H9Q4 299 aaPredicted RBP7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 RASSF1Q9NS23 344 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PRR13Q9NZ81 148 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 PCYOX1Q9UHG3 505 aa7.85□□□□□ -1.15
NIF3L1-208ENST00000436412 MAGEB17A8MXT2 336 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 FAM47E-STBD1D6RA91 191 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 MYO1CO00159 1063 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 FCHO1O14526 889 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 P2RX6O15547 441 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 PEX1O43933 1283 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 HS6ST1O60243 411 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 KIF5CO60282 957 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 CDC40O60508 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 TJP3O95049 919 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 METTL18O95568 372 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 INHBBP09529 407 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 HRH2P25021 359 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 ZFP36L2P47974 494 aaKnown RBP7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 MARCKSL1P49006 195 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 NUP107P57740 925 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 OR4D2P58180 307 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 MLF1P58340 268 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SLC26A5P58743 744 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 ERVFRD-1P60508 538 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 RPS15AP62244 130 aaKnown RBP7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SLC25A35Q3KQZ1 300 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 CCDC38Q502W7 563 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 EMC4Q5J8M3 183 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 C11orf63Q6NUN7 778 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SUSD1Q6UWL2 747 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 ZNF227Q86WZ6 799 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 FAM71DQ8N9W8 422 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 TMEM52Q8NDY8 209 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 OR5M3Q8NGP4 307 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 P2RY12Q9H244 342 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 LIME1Q9H400 295 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SYNPO2LQ9H987 977 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 FAM114A2Q9NRY5 505 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 CATSPERZQ9NTU4 200 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SPTLC3Q9NUV7 552 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 PIH1D1Q9NWS0 290 aaKnown RBP7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 SLC2A6Q9UGQ3 507 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 TAC3Q9UHF0 121 aa7.84□□□□□ -1.15
NIF3L1-208ENST00000436412 PLEKHA6Q9Y2H5 1048 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms