RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 BCL9O00512 1426 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ALDOBP05062 364 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FAM163BP0C2L3 166 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 BDKRB1P46663 353 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 NIPAL4Q0D2K0 466 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 PAPD5Q8NDF8 572 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 OR6N2Q8NGY6 317 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 CD300LFQ8TDQ1 290 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 S100PBPQ96BU1 408 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 KCNC2Q96PR1 638 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 PITX2Q99697 317 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FMO3P31513 532 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 MADCAM1Q13477 382 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C6orf141Q5SZD1 244 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 CERS5Q8N5B7 392 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C7orf50Q9BRJ6 194 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 DNAJB11Q9UBS4 358 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 INSL5Q9Y5Q6 135 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C11orf98E9PRG8 122 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 SCO2O43819 266 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 CER1O95813 267 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 GNAO1P09471 354 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RRAS2P62070 204 aaPredicted RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 CDK6Q00534 326 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ACY1Q03154 408 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 PCBP2Q15366 365 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 LCTLQ6UWM7 567 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ASPGQ86U10 573 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C1orf52Q8N6N3 182 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C7orf26Q96N11 449 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF641Q96N77 438 aaPredicted RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RLIMQ9NVW2 624 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 AP1M2Q9Y6Q5 423 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TRBC2A0A5B9 178 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FXYD6P3P58550 94 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TUBA3CQ13748 450 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 NCEH1Q6PIU2 408 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF554Q86TJ5 538 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 OR9A2Q8NGT5 310 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TXN2Q99757 166 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C1orf21Q9H246 121 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 IL21RQ9HBE5 538 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 HIF1ANQ9NWT6 349 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 IGSF9Q9P2J2 1179 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 AMY2BP19961 511 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 UGT1A4P22310 534 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RABIFP47224 123 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 LEPRP48357 1165 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RPS15AP62244 130 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RSU1Q15404 277 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RAB11BQ15907 218 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 WSCD2Q2TBF2 565 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C22orf39Q6P5X5 142 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FCRL5Q96RD9 977 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FEM1AQ9BSK4 669 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FXYD6Q9H0Q3 95 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FAM120CQ9NX05 1096 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TAS2R1Q9NYW7 299 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RABL2AQ9UBK7 228 aaPredicted RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ATRNO75882 1429 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ACOX3O15254 700 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PROM1O43490 865 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SLC34A2O95436 690 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 TCTE1Q5JU00 501 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 OR5J2Q8NH18 312 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 AUTS2Q8WXX7 1259 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 GIN1Q9NXP7 522 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 REV1Q9UBZ9 1251 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 MCTS1Q9ULC4 181 aaKnown RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SOCS5O75159 536 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 EEFSECP57772 596 aaKnown RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 PRR11Q96HE9 360 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 FUZQ9BT04 418 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM98Q9Y2Y6 226 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 SFTPBP07988 381 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 IFI30P13284 250 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 CDK2P24941 298 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ODF4Q2M2E3 257 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 FBXO48Q5FWF7 155 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 CBR4Q8N4T8 237 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 METTL27Q8N6F8 245 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 OR13C3Q8NGS6 347 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 OR5AK3PQ8NH89 298 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 RAB2BQ8WUD1 216 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 DIO2Q92813 273 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 LPAR4Q99677 370 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 C2orf42Q9NWW7 574 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 hCG_1809904A0A1W2PP81 198 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 A0A1W2PPE2 198 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 A0A1W2PR64 198 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 A0A1W2PRV1 198 aa10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF99A8MXY4 864 aaPredicted RBP10.8□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF805Q5CZA5 627 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms