RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 KRT71Q3SY84 523 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 MINDY4Q4G0A6 757 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 QSOX2Q6ZRP7 698 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 NDUFAF7Q7L592 441 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 CLEC1AQ8NC01 280 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 C9orf43Q8TAL5 461 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-220ENST00000434407 PPP4R1Q8TF05 950 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 ZIM3Q96PE6 472 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF700Q9H0M5 742 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 GSTO2Q9H4Y5 243 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 ATP13A2Q9NQ11 1180 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 KCMF1Q9P0J7 381 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
HLA-F-220ENST00000434407 K7EM74 188 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 MASP2O00187 686 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 ERLIN1O75477 346 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 PRB1P04280 392 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 CPA3P15088 417 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 HIST1H1TP22492 207 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-220ENST00000434407 JAK1P23458 1154 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 CERS1P27544 350 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 NEK2P51955 445 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 RAB38P57729 211 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 Q0VFX4 171 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 LCP2Q13094 533 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 DDX39BQ13838 428 aaKnown RBP17.29■□□□□ 0.36
HLA-F-220ENST00000434407 PCOLCEQ15113 449 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 FAAH2Q6GMR7 532 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 GALNT16Q8N428 558 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 ACOT4Q8N9L9 421 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 FDCSPQ8NFU4 85 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 ADAMTS18Q8TE60 1221 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 RGMAQ96B86 450 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 SLC25A23Q9BV35 468 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF717Q9BY31 904 aaPredicted RBP17.29■□□□□ 0.36
HLA-F-220ENST00000434407 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 LYRM4Q9HD34 91 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 MID2Q9UJV3 735 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 DAPP1Q9UN19 280 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 STK38LQ9Y2H1 464 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 PCDHGB7Q9Y5F8 929 aa17.29■□□□□ 0.36
HLA-F-220ENST00000434407 PRRC2CQ9Y520 2896 aaKnown RBP17.29■□□□□ 0.36
HLA-F-220ENST00000434407 IGKV3D-11A0A0A0MRZ8 115 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 FAM227AF5H4B4 570 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 RTCAO00442 366 aaKnown RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 CYR61O00622 381 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 PLPP1O14494 284 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 TYROBPO43914 113 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 OR4F21O95013 312 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 ETHE1O95571 254 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 CREB1P16220 341 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 ARL1P40616 181 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 LIM2P55344 173 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 PKNOX1P55347 436 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 MYBPC3Q14896 1274 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 PCLAFQ15004 111 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 OR4C11Q6IEV9 310 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 FRMD7Q6ZUT3 714 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 LANCL3Q6ZV70 420 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 GPRIN3Q6ZVF9 776 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 CPEB2Q7Z5Q1 589 aaKnown RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 ANKRD37Q7Z713 158 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 CROCCP2Q86T23 111 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 ZNF843Q8N446 348 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 METTL21AQ8WXB1 218 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 IMMP1LQ96LU5 166 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 SMC6Q96SB8 1091 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 SMAD5Q99717 465 aaKnown RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 WDR77Q9BQA1 342 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 CENPKQ9BS16 269 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 NUDT9Q9BW91 350 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 SLC29A3Q9BZD2 475 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 COPS7BQ9H9Q2 264 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-220ENST00000434407 TP53TG5Q9Y2B4 290 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 MMACHCQ9Y4U1 282 aa17.28■□□□□ 0.36
HLA-F-220ENST00000434407 FASNP49327 2511 aaKnown RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 NSG1A0A0A6YYJ2 146 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 PSMD12O00232 456 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 RGS16O15492 202 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 PRMT3O60678 531 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 B4GALT2O60909 372 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SH3BGRLO75368 114 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 CDC123O75794 336 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SEMA3DO95025 777 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 PDGFAP04085 211 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 BSGP35613 385 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 NAGLUP54802 743 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 EEF1A2Q05639 463 aaKnown RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 IFT88Q13099 833 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 ABRAXAS2Q15018 415 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 AP5B1Q2VPB7 878 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 MFSD4BQ5TF39 518 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 LIPMQ5VYY2 423 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 SCUBE1Q8IWY4 988 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 ZCCHC7Q8N3Z6 543 aaKnown RBP17.27■□□□□ 0.36
HLA-F-220ENST00000434407 ARMC2Q8NEN0 867 aa17.27■□□□□ 0.36
HLA-F-220ENST00000434407 TCP10LQ8TDR4 215 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms