RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CLCNKAP51800 687 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CDH15P55291 814 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 KCNAB2Q13303 367 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 TOP3AQ13472 1001 aaPredicted RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 GAB1Q13480 694 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ZNF385BQ569K4 471 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 KHDRBS2Q5VWX1 349 aaKnown RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 DCP2Q8IU60 420 aaKnown RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SLC30A8Q8IWU4 369 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SPEM1Q8N4L4 309 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ZNF740Q8NDX6 193 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 OR4K1Q8NGD4 311 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 WDR48Q8TAF3 677 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 TOE1Q96GM8 510 aaKnown RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 HSH2DQ96JZ2 352 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SLC35A5Q9BS91 424 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 MENTQ9BUN1 341 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CHRDQ9H2X0 955 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 TMEM38AQ9H6F2 299 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SOX17Q9H6I2 414 aaPredicted RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 MBNL1Q9NR56 388 aaKnown RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 PLAGL1Q9UM63 463 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SCML1Q9UN30 329 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CA5BQ9Y2D0 317 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 LOC100130705A0A1B0GUX0 176 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 KDM1AO60341 852 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 UGT2B11O75310 529 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 TECTAO75443 2155 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 NTRK1P04629 796 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ITGAMP11215 1152 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 RYKP34925 604 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ITGA1P56199 1179 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 GABARAPL2P60520 117 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 REEP5Q00765 189 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 HEPACAMQ14CZ8 416 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ANGPTL8Q6UXH0 198 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CHST15Q7LFX5 561 aaPredicted RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 VN1R5Q7Z5H4 357 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 SETD9Q8NE22 299 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 TTLQ8NG68 377 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CLDN23Q96B33 292 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ZNF764Q96H86 408 aaPredicted RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 DPH2Q9BQC3 489 aaPredicted RBP11.4□□□□□ -0.58
CTCFL-209ENST00000433949 DOHHQ9BU89 302 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 ACAT2Q9BWD1 397 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 MS4A8Q9BY19 250 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 REEP1Q9H902 201 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 PADI2Q9Y2J8 665 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 OR1A2Q9Y585 309 aa11.4□□□□□ -0.58
CTCFL-209ENST00000433949 CACNA1IQ9P0X4 2223 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 A0A1W2PRB8 838 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 SAP18O00422 153 aaKnown RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 C6orf47O95873 294 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 IFNA14P01570 189 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 IGFBP5P24593 272 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TPP2P29144 1249 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 CRATP43155 626 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 CXCL12P48061 93 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 RAB28P51157 221 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 DMWDQ09019 674 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TMEM259Q4ZIN3 620 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 GCNT6Q5T4J0 391 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 BROXQ5VW32 411 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 ZNF773Q6PK81 442 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 USP30Q70CQ3 517 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TMEM179BQ7Z7N9 219 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 NAGSQ8N159 534 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 PIK3C3Q8NEB9 887 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 ZNF420Q8TAQ5 688 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 MPP4Q96JB8 637 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 CNDP2Q96KP4 475 aaKnown RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 C12orf66Q96MD2 445 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 MBOAT4Q96T53 435 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 GPR174Q9BXC1 333 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 SLC17A9Q9BYT1 436 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TM7SF3Q9NS93 570 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TMEFF2Q9UIK5 374 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 ADAM29Q9UKF5 820 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 ABCG2Q9UNQ0 655 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 SLC17A4Q9Y2C5 497 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 HSPE1-MOB4S4R3N1 261 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 U3KQV3 271 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 LAMA1P25391 3075 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 PLPP1O14494 284 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 TNFRSF21O75509 655 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 GBAP04062 536 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 IL3P08700 152 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 DDCP20711 480 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 EFNA1P20827 205 aaPredicted RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 EEF1B2P24534 225 aaKnown RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 RPL10P27635 214 aaKnown RBP11.39□□□□□ -0.59
CTCFL-209ENST00000433949 GSTM2P28161 218 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 PRIM2P49643 509 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 MVDP53602 400 aa11.39□□□□□ -0.59
CTCFL-209ENST00000433949 MAPK12P53778 367 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms