RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 NACC2Q96BF6 587 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 BTF3L4Q96K17 158 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TMEM27Q9HBJ8 222 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PKDREJQ9NTG1 2253 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TMEM150BA6NC51 233 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CASTOR2A6NHX0 329 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PRR23D1E9PI22 279 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TSPAN3O60637 253 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 STC2O76061 302 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ALPLP05186 524 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 C8AP07357 584 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HNRNPCP07910 306 aaKnown RBP eCLIP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 THBS1P07996 1170 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PRR23D2P0DMB1 279 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 BCKDHAP12694 445 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HIST1H1TP22492 207 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 S100GP29377 79 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RBMS1P29558 406 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CLCN7P51798 805 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SELPLGQ14242 412 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PCSK7Q16549 785 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PPP1R3AQ16821 1122 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ITPRIPL2Q3MIP1 535 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF675Q8TD23 568 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR1F2PQ96R84 312 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DUSP21Q9H596 190 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 AKTIPQ9H8T0 292 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF780BQ9Y6R6 833 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 FREM3P0C091 2139 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PLXNA2O75051 1894 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PLXNA4Q9HCM2 1894 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DOPEY1Q5JWR5 2465 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 A0A0U1RQJ8 604 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DNPH1O43598 174 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RAF1P04049 648 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OCM2P0CE71 109 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OCMP0CE72 109 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC6A8P48029 635 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ARPC4P59998 168 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF169Q14929 603 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 FASTKD3Q14CZ7 662 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GLYATQ6IB77 296 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NANOGP8Q6NSW7 305 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RTL4Q6ZR62 310 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RAB43Q86YS6 212 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ARHGAP12Q8IWW6 846 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ARFGAP1Q8N6T3 406 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PNPLA2Q96AD5 504 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CAPNS2Q96L46 248 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR2M4Q96R27 311 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 P2RY13Q9BPV8 354 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 C1QTNF1Q9BXJ1 281 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR2B2Q9GZK3 357 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NANOGQ9H9S0 305 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SDHAF3Q9NRP4 125 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SACM1LQ9NTJ5 587 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC35A3Q9Y2D2 325 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HHLA1C9JL84 531 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RAB36O95755 333 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TYRP14679 529 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SYN1P17600 705 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 MPSTP25325 297 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PIGAP37287 484 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 APLP1P51693 650 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DDX39BQ13838 428 aaKnown RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 UGT3A2Q3SY77 523 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NHSL2Q5HYW2 709 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DENND5AQ6IQ26 1287 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 RNF130Q86XS8 419 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 C19orf18Q8NEA5 215 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TTC16Q8NEE8 873 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR4F6Q8NGB9 312 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 MCFD2Q8NI22 146 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 FAM216AQ8WUB2 273 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC25A43Q8WUT9 341 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF570Q96NI8 536 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TECTBQ96PL2 329 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC28A3Q9HAS3 691 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 IL23AQ9NPF7 189 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HECAQ9UBI9 543 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 KLHL21Q9UJP4 597 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TRBC2A0A5B9 178 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DDNO94850 711 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 GLAP06280 429 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 MLLT3P42568 568 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ECH1Q13011 328 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SLC36A4Q6YBV0 504 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 CYP4V2Q6ZWL3 525 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 PHC2Q8IXK0 858 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 HS3ST5Q8IZT8 346 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SMYD1Q8NB12 490 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 VN1R2Q8NFZ6 395 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR9A1PQ8NGU1 263 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 OR10T2Q8NGX3 314 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 BTN2A2Q8WVV5 523 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NSMAFQ92636 917 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 C12orf66Q96MD2 445 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ATXN3LQ9H3M9 355 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 DUSP22Q9NRW4 184 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 SPATA6Q9NWH7 488 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms