RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PRSS41Q7RTY9 318 aa25.08■■□□□ 1.61
TMEM248-205ENST00000433271 CDC26Q8NHZ8 85 aa25.08■■□□□ 1.61
TMEM248-205ENST00000433271 CMKLR1Q99788 373 aa25.08■■□□□ 1.61
TMEM248-205ENST00000433271 CUTCQ9NTM9 273 aa25.08■■□□□ 1.61
TMEM248-205ENST00000433271 ARL8BQ9NVJ2 186 aa25.08■■□□□ 1.61
TMEM248-205ENST00000433271 FAM234BA2RU67 622 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 EFCAB7A8K855 629 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 GUCY1B2O75343 617 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 LRATO95237 230 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 MED26O95402 600 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 MT-CO3P00414 261 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 POLR2JP52435 117 aaKnown RBP25.08■■□□□ 1.6
TMEM248-205ENST00000433271 IL11RAQ14626 422 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 MAPRE2Q15555 327 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 ZSCAN26Q16670 478 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 FAM71E1Q6IPT2 247 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 BMPERQ8N8U9 685 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 RP9Q8TA86 221 aaKnown RBP25.08■■□□□ 1.6
TMEM248-205ENST00000433271 STARD8Q92502 1023 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 GFM2Q969S9 779 aaKnown RBP25.08■■□□□ 1.6
TMEM248-205ENST00000433271 TESCQ96BS2 214 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 NDC1Q9BTX1 674 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 TUBB6Q9BUF5 446 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 CLMPQ9H6B4 373 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 LYARQ9NX58 379 aaKnown RBP25.08■■□□□ 1.6
TMEM248-205ENST00000433271 ASB4Q9Y574 426 aa25.08■■□□□ 1.6
TMEM248-205ENST00000433271 SPAARA0A1B0GVQ0 90 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 FOXS1O43638 330 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 IL3P08700 152 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 ZFP36L2P47974 494 aaKnown RBP25.07■■□□□ 1.6
TMEM248-205ENST00000433271 ARSFP54793 590 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 RCAN2Q14206 197 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 TSPEARQ8WU66 669 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 NSL1Q96IY1 281 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 NPLQ9BXD5 320 aaPredicted RBP25.07■■□□□ 1.6
TMEM248-205ENST00000433271 TAGLN3Q9UI15 199 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 SCN3AQ9NY46 2000 aa25.07■■□□□ 1.6
TMEM248-205ENST00000433271 LOC100653049A0A140TA62 436 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 C9JVG2 144 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 ZNF749O43361 778 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 AKAP10O43572 662 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 KRT34O76011 436 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 NSA2O95478 260 aaKnown RBP25.06■■□□□ 1.6
TMEM248-205ENST00000433271 SNRPB2P08579 225 aaKnown RBP25.06■■□□□ 1.6
TMEM248-205ENST00000433271 FTH1P19P0C7X4 201 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 COX4I1P13073 169 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 CEACAM1P13688 526 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 HPCAL1P37235 193 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 KCNK10P57789 538 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 MC2RQ01718 297 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 KLC1Q07866 573 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 C2orf80Q0P641 193 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 CYLC2Q14093 348 aaPredicted RBP25.06■■□□□ 1.6
TMEM248-205ENST00000433271 HEPACAMQ14CZ8 416 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 GK5Q6ZS86 529 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 GPR180Q86V85 440 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 OR9A4Q8NGU2 314 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 MVB12AQ96EY5 273 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 SLC25A23Q9BV35 468 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 REEP4Q9H6H4 257 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 LYRM4Q9HD34 91 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 FBXO8Q9NRD0 319 aa25.06■■□□□ 1.6
TMEM248-205ENST00000433271 EXO1Q9UQ84 846 aaKnown RBP25.06■■□□□ 1.6
TMEM248-205ENST00000433271 A0A0A6YYC8 382 aaPredicted RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 I3L1I5 382 aaPredicted RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 SGK494L7N484 410 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 HYAL3O43820 417 aaPredicted RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 CBX6O95503 412 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 HNRNPH2P55795 449 aaKnown RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 SIM1P81133 766 aaPredicted RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 RUNX2Q13950 521 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 SNX32Q86XE0 403 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 PPP1R3BQ86XI6 285 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 NUDT8Q8WV74 236 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 DEPDC7Q96QD5 511 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 CLK4Q9HAZ1 481 aaKnown RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 TEX10Q9NXF1 929 aaPredicted RBP25.05■■□□□ 1.6
TMEM248-205ENST00000433271 KCMF1Q9P0J7 381 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 PHF11Q9UIL8 331 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 FBXW2Q9UKT8 454 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 DAPP1Q9UN19 280 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 SRPK3Q9UPE1 567 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 ATG4BQ9Y4P1 393 aa25.05■■□□□ 1.6
TMEM248-205ENST00000433271 ZNF860A6NHJ4 632 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 B4E171 279 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 H0YIG0 161 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 NR5A2O00482 541 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 SLC30A4O14863 429 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 SCAMP2O15127 329 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 PROM1O43490 865 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 CSO75390 466 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 IL6P05231 212 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 T-ENOLP0DO92 83 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 FGF5P12034 268 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 DRD2P14416 443 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 RPL3P39023 403 aaKnown RBP25.04■■□□□ 1.6
TMEM248-205ENST00000433271 TSPAN7P41732 249 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 AVPR1BP47901 424 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 LIM2P55344 173 aa25.04■■□□□ 1.6
TMEM248-205ENST00000433271 BNIP1Q12981 228 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms