RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 MEF2DQ14814 521 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 RPS6KA1Q15418 735 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 LPAL2Q16609 132 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 CT45A2Q5DJT8 189 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ZNF542PQ5EBM4 170 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 CCDC158Q5M9N0 1113 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 LIPJQ5W064 366 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SNRNP48Q6IEG0 339 aaKnown RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 ZNF770Q6IQ21 691 aaPredicted RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 SHQ1Q6PI26 577 aaKnown RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 FAM47EQ6ZV65 393 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 RAPH1Q70E73 1250 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 PTAR1Q7Z6K3 402 aaPredicted RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 PIGWQ7Z7B1 504 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ZNF440Q8IYI8 595 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SYCP3Q8IZU3 236 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 CARNMT1Q8N4J0 409 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ANKRD13CQ8N6S4 541 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 CLEC1AQ8NC01 280 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 KIAA0895Q8NCT3 520 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 MSANTD4Q8NCY6 345 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 PRSS33Q8NF86 280 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 RPLP0P6Q8NHW5 317 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 OLIG1Q8TAK6 271 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 TCP11Q8WWU5 503 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SEPT8Q92599 483 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 EXOC4Q96A65 974 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ZNF689Q96CS4 500 aaPredicted RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 AP2M1Q96CW1 435 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 NXPE2Q96DL1 559 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 PRAC1Q96KF2 57 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 GUCD1Q96NT3 240 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ANKRD27Q96NW4 1050 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 GPATCH1Q9BRR8 931 aaKnown RBP1.81□□□□□ -2.12
CDC40-204ENST00000431461 FAM213AQ9BRX8 229 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SYT11Q9BT88 431 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 STRADBQ9C0K7 418 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 PARLQ9H300 379 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 CUEDC2Q9H467 287 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 MAGEF1Q9HAY2 307 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SPHK2Q9NRA0 654 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 TMOD3Q9NYL9 352 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 SEPT10Q9P0V9 454 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 MTRRQ9UBK8 725 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 DNAJB9Q9UBS3 223 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 NSG2Q9Y328 171 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 PCDHGA1Q9Y5H4 931 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 AUP1Q9Y679 476 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ARID2Q68CP9 1835 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 ACEP12821 1306 aa1.81□□□□□ -2.12
CDC40-204ENST00000431461 A0A087X002 238 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 A0A087X0K7 114 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 TRBV2A0A0J9YWF9 115 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 TMEM129A0AVI4 362 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 MTMR11A4FU01 709 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 TMCO5BA8MYB1 307 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 TTI1O43156 1089 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 IDH3BO43837 385 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ZNF821O75541 412 aaPredicted RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 RPLP0P05388 317 aaKnown RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 APRTP07741 180 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 SNRPCP09234 159 aaKnown RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 ANKRD34CP0C6C1 535 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ADORA3P0DMS8 318 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 UROSP10746 265 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 GLULP15104 373 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 VCLP18206 1134 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 CYP3A5P20815 502 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ACKR3P25106 362 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 CTNNB1P35222 781 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 OPRL1P41146 370 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 NKX2-1P43699 371 aaPredicted RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 ZFP36L2P47974 494 aaKnown RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 SLC1A6P48664 564 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 CLK1P49759 484 aaKnown RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 KCNK10P57789 538 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 SSTP61278 116 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 MFGE8Q08431 387 aaPredicted RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 RCN2Q14257 317 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 SPANXN4Q5MJ08 99 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ARMC3Q5W041 872 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 PM20D1Q6GTS8 502 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 B3GLCTQ6Y288 498 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 Q6ZVQ6 151 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 PIWIL3Q7Z3Z3 882 aaKnown RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 GTSCR1Q86UQ5 136 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 CATSPERDQ86XM0 798 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 CATSPER3Q86XQ3 398 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 GVQW1Q8N7I0 195 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 COLGALT1Q8NBJ5 622 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 UXS1Q8NBZ7 420 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ICA1LQ8NDH6 482 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 LPCAT1Q8NF37 534 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 GGHQ92820 318 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ZNF486Q96H40 463 aaPredicted RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 C2orf48Q96LS8 159 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 ZNF599Q96NL3 588 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 NAP1L3Q99457 506 aaPredicted RBP1.8□□□□□ -2.12
CDC40-204ENST00000431461 S1PR3Q99500 378 aa1.8□□□□□ -2.12
CDC40-204ENST00000431461 C19orf43Q9BQ61 176 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms