RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TMTC4Q5T4D3 741 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 TRIM48Q8IWZ4 208 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 FAM47BQ8NA70 645 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 OR52E4Q8NGH9 312 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 TMBIM1Q969X1 311 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 EXOSC8Q96B26 276 aaKnown RBP15.88■□□□□ 0.13
USHBP1-203ENST00000431146 MTERF3Q96E29 417 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SLX1AQ9BQ83 275 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 BDH2Q9BUT1 245 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 TRIM4Q9C037 500 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SNX8Q9Y5X2 465 aa15.88■□□□□ 0.13
USHBP1-203ENST00000431146 SDK1Q7Z5N4 2213 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 IGHV1OR15-9A0A0B4J2B8 117 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 SPTY2D1-AS1A0A0U1RR47 76 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 MYOCOSA0A1B0GUC4 107 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 FAM170BA6NMN3 283 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 CHURC1-FNTBB4DL54 471 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 H0YJX3 145 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 PLOD2O00469 737 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 ERI3O43414 337 aaKnown RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 CCNDBP1O95273 360 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 CST1P01037 141 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 NELFEP18615 380 aaKnown RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 POLR2CP19387 275 aaPredicted RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 CHN2P52757 468 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 MVDP53602 400 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 IYDQ6PHW0 289 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 SPRED1Q7Z699 444 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF761Q86XN6 746 aaPredicted RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 SYNPOQ8N3V7 929 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 OR8K5Q8NH50 307 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 GOT1L1Q8NHS2 421 aaPredicted RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 MAGEE2Q8TD90 523 aaPredicted RBP15.87■□□□□ 0.13
USHBP1-203ENST00000431146 TAS2R9Q9NYW1 312 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 MAP4K5Q9Y4K4 846 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 ABCA7Q8IZY2 2146 aa15.87■□□□□ 0.13
USHBP1-203ENST00000431146 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 GSAPA4D1B5 854 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 OR6C74A6NCV1 312 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 DEAF1O75398 565 aaPredicted RBP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 SMNDC1O75940 238 aaKnown RBP eCLIP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 RASAL1O95294 804 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 CHI3L1P36222 383 aaPredicted RBP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 VAC14Q08AM6 782 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 SPIDRQ14159 915 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 ZIC1Q15915 447 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 SLC5A12Q1EHB4 618 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 NHSL2Q5HYW2 709 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 TOR1AIP1Q5JTV8 583 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 ZNF425Q6IV72 752 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 VTCN1Q7Z7D3 282 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 TTLQ8NG68 377 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 GPBAR1Q8TDU6 330 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 MS4A6EQ96DS6 147 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 PYURFQ96I23 114 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 ORAI3Q9BRQ5 295 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 OSBPL11Q9BXB4 747 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 DDX31Q9H8H2 851 aaKnown RBP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 LTB4R2Q9NPC1 389 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 FBXL21Q9UKT6 434 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 AP1M2Q9Y6Q5 423 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 SPEGQ15772 3267 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 A0A0A6YYD5 115 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 GLOD5A6NK44 160 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 MAGP20916 626 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 KDELR2P33947 212 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 RAB8AP61006 207 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 SNRPNP63162 240 aaKnown RBP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 LRRC74AQ0VAA2 488 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 HEPACAMQ14CZ8 416 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 TAF8Q7Z7C8 310 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 RNF130Q86XS8 419 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 HS3ST5Q8IZT8 346 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 FLVCR1-AS1Q8TAF5 88 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 QRFPRQ96P65 431 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 CXorf36Q9H7Y0 433 aa15.86■□□□□ 0.13
USHBP1-203ENST00000431146 FAF1Q9UNN5 650 aaPredicted RBP15.86■□□□□ 0.13
USHBP1-203ENST00000431146 ZW10O43264 779 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 AHCYL1O43865 530 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 VIPP01282 170 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 GNAO1P09471 354 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 FOSL2P15408 326 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 MAOBP27338 520 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 HSPB3Q12988 150 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 LEXMQ3ZCV2 418 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 TJAP1Q5JTD0 557 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 ERICH5Q6P6B1 374 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 CHERPQ8IWX8 916 aaKnown RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 PACRGLQ8N7B6 248 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 TRIML2Q8N7C3 387 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 OR2A14Q96R47 310 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 SOX17Q9H6I2 414 aaPredicted RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 CPNE7Q9UBL6 633 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 APOBEC3BQ9UH17 382 aaKnown RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 SNX7Q9UNH6 387 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 DMTF1Q9Y222 760 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 GNGT2O14610 69 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 ZSCAN9O15535 394 aaPredicted RBP15.85■□□□□ 0.13
USHBP1-203ENST00000431146 PRAMEF10O60809 474 aa15.85■□□□□ 0.13
USHBP1-203ENST00000431146 CTSEP14091 401 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms