RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RTCAO00442 366 aaKnown RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CAPN5O15484 640 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PRICKLE3O43900 615 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 RECKO95980 971 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CDK4P11802 303 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ACP5P13686 325 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 MATN1P21941 496 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 UQCRC2P22695 453 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 AQP1P29972 269 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 GSTM5P46439 218 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PXNP49023 591 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 ARHGDIAP52565 204 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PCBP4P57723 403 aaKnown RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 TRIM40Q6P9F5 258 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 GALNT5Q7Z7M9 940 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 RNF130Q86XS8 419 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NATD1Q8N6N6 113 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 OR2A1Q8NGT9 310 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CREB3L4Q8TEY5 395 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 CAMK1GQ96NX5 476 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 GABARAPL3Q9BY60 117 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 NAA50Q9GZZ1 169 aaKnown RBP13.31□□□□□ -0.28
HOXC4-202ENST00000430889 REEP1Q9H902 201 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 EXD2Q9NVH0 621 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 PCDHGB1Q9Y5G3 927 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 LYVE1Q9Y5Y7 322 aa13.31□□□□□ -0.28
HOXC4-202ENST00000430889 FEZF1A0PJY2 475 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 H7BY64 318 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 RFXAPO00287 272 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 TMPRSS11DO60235 418 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 LCMT2O60294 686 aaKnown RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 KCNJ13O60928 360 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 KRT75O95678 551 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 TIE1P35590 1138 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 MAGEA10P43363 369 aaPredicted RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 RXRGP48443 463 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 RAB28P51157 221 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 ADPRHP54922 357 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CASP9P55211 416 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CXCR4P61073 352 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CYP4F2P78329 520 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CDK6Q00534 326 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PRDX1Q06830 199 aaKnown RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 TMEM196Q5HYL7 178 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 GPR107Q5VW38 600 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PAGE2Q7Z2X7 111 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 B3GNT8Q7Z7M8 397 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 ZC3H7AQ8IWR0 971 aaKnown RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 SETD9Q8NE22 299 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 OR2L8Q8NGY9 312 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 OR5AK3PQ8NH89 298 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PSMA8Q8TAA3 256 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CNIH3Q8TBE1 160 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 KLK6Q92876 244 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 MUL1Q969V5 352 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PDXPQ96GD0 296 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 C12orf66Q96MD2 445 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PRAP1Q96NZ9 151 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 TRMT61BQ9BVS5 477 aaKnown RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 ADNPQ9H2P0 1102 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 DDX31Q9H8H2 851 aaKnown RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
HOXC4-202ENST00000430889 TMEM184CQ9NVA4 438 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 BAG5Q9UL15 447 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 PCDHGB3Q9Y5G1 929 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 MYO10Q9HD67 2058 aa13.3□□□□□ -0.28
HOXC4-202ENST00000430889 MDC1Q14676 2089 aaKnown RBP13.29□□□□□ -0.28
HOXC4-202ENST00000430889 A0A0A6YYD5 115 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 A0A1W2PQU0 124 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 NDUFS4O43181 175 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 B4GALT2O60909 372 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 ADAM23O75077 832 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 CLEC3AO75596 197 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 ITIH1P19827 911 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 EEF1B2P24534 225 aaKnown RBP13.29□□□□□ -0.28
HOXC4-202ENST00000430889 ACVR2AP27037 513 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 EPHA2P29317 976 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 LIMS1P48059 325 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 MAPK12P53778 367 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 TMBIM6P55061 237 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 TPD52P55327 224 aaPredicted RBP13.29□□□□□ -0.28
HOXC4-202ENST00000430889 ZIC1Q15915 447 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 IFI44LQ53G44 452 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 SLC30A8Q8IWU4 369 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 TTC29Q8NA56 475 aaPredicted RBP13.29□□□□□ -0.28
HOXC4-202ENST00000430889 APOBEC4Q8WW27 367 aaKnown RBP13.29□□□□□ -0.28
HOXC4-202ENST00000430889 GAB3Q8WWW8 586 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
HOXC4-202ENST00000430889 PSD2Q9BQI7 771 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms