RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 HAS2Q92819 552 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 REPS1Q96D71 796 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 SNRNP40Q96DI7 357 aaKnown RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PHF21BQ96EK2 531 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CMTM7Q96FZ5 175 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CNDP1Q96KN2 507 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 F2RL3Q96RI0 385 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CCDC77Q9BR77 488 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CENPKQ9BS16 269 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 TBCDQ9BTW9 1192 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 MS4A8Q9BY19 250 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 SLC29A3Q9BZD2 475 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 MMP25Q9NPA2 562 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PRDM7Q9NQW5 492 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 DAPP1Q9UN19 280 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 MRPS33Q9Y291 106 aaKnown RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PCDHGA10Q9Y5H3 936 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CSAG2Q9Y5P2 127 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
HDAC6-207ENST00000430858 TCRBV16S1A1N1A0A5B0 115 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 LRRC14BA6NHZ5 514 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 A8MUI8 341 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 H0YIV9 168 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 TGFB1P01137 390 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 MYBL2P10244 700 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 MAOAP21397 527 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 CERS1P27544 350 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 TNFRSF8P28908 595 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 TSFMP43897 325 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ARFIP1P53367 373 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 LIM2P55344 173 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 HSD17B7P56937 341 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 SLC26A5P58743 744 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 TAS2R50P59544 299 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 DEPDC1Q5TB30 811 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 KHDRBS2Q5VWX1 349 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 H3F3CQ6NXT2 135 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 RPUSD3Q6P087 351 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF595Q8IYB9 648 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 GSPT2Q8IYD1 628 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 CISD2Q8N5K1 135 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 SLC5A8Q8N695 610 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 L3MBTL4Q8NA19 623 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ACMSDQ8TDX5 336 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ATP6V1E2Q96A05 226 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF354BQ96LW1 612 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 NTMT1Q9BV86 223 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 EPB41L4BQ9H329 900 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 IPPKQ9H8X2 491 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 PPCSQ9HAB8 311 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 KCNK13Q9HB14 408 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 LYRM4Q9HD34 91 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 NECTIN3Q9NQS3 549 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 PRTFDC1Q9NRG1 225 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 AGPAT4Q9NRZ5 378 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 PSD3Q9NYI0 1048 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 STMN3Q9NZ72 180 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 ABI3Q9P2A4 366 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 PSMC3IPQ9P2W1 217 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 COPG1Q9Y678 874 aaKnown RBP9.21□□□□□ -0.94
HDAC6-207ENST00000430858 SPACA6W5XKT8 324 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 SCN3AQ9NY46 2000 aa9.21□□□□□ -0.94
HDAC6-207ENST00000430858 TRAV17A0A0B4J275 112 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 BLACEA4D250 179 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 SAGE2PA6NJ88 616 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CYR61O00622 381 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CDK2AP1O14519 115 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 SCELO95171 688 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ZIC2O95409 532 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CLDN9O95484 217 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 WDPCPO95876 746 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 TAC1P20366 129 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 HIST1H1TP22492 207 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ATP5A1P25705 553 aaKnown RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 PTX3P26022 381 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ARL1P40616 181 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 TNFSF10P50591 281 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CCNG1P51959 295 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 RAP1GDS1P52306 607 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF33BQ06732 778 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 SLC13A2Q13183 592 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 DDX39BQ13838 428 aaKnown RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 TERF2Q15554 542 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CPSF6Q16630 551 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 MEP1AQ16819 746 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 AP5B1Q2VPB7 878 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ACER2Q5QJU3 275 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 C10orf62Q5T681 223 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF793Q6ZN11 406 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 LGI4Q8N135 537 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 ACOT4Q8N9L9 421 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 FAM47BQ8NA70 645 aa9.2□□□□□ -0.94
HDAC6-207ENST00000430858 CATSPER1Q8NEC5 780 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms