RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 TNFRSF12AQ9NP84 129 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 FARSBQ9NSD9 589 aaKnown RBP6.22□□□□□ -1.41
SMC6-205ENST00000430591 DNAJB12Q9NXW2 375 aaKnown RBP6.22□□□□□ -1.41
SMC6-205ENST00000430591 GPR83Q9NYM4 423 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 ZFP69BQ9UJL9 534 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 ZNF225Q9UK10 706 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 RNF11Q9Y3C5 154 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 CLDN16Q9Y5I7 305 aa6.22□□□□□ -1.41
SMC6-205ENST00000430591 MYO18BQ8IUG5 2567 aa6.21□□□□□ -1.41
SMC6-205ENST00000430591 IGHV1-45A0A0A0MS14 117 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 CYSRT1A8MQ03 144 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 A8MT66 165 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 MKRN2OSH3BPM6 223 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 K7EPI3 171 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 E2F3O00716 465 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ERI3O43414 337 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 KLK8O60259 260 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PRKNO60260 465 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 ZNF500O60304 480 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 TGFB1P01137 390 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 HEXBP07686 556 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ABHD2P08910 425 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 GFAPP14136 432 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ACPPP15309 386 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 CHN1P15882 459 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 CREB1P16220 341 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 ALOX12P18054 663 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PTGER1P34995 402 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 HSD17B3P37058 310 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 HNMTP50135 292 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 HTR6P50406 440 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 OCA2Q04671 838 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 SRSF1Q07955 248 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC6-205ENST00000430591 TRAF3Q13114 568 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 GTF2H2Q13888 395 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 FAM53BQ14153 422 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ACAP2Q15057 778 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ERCC6LQ2NKX8 1250 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 C11orf91Q3C1V1 193 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 TUBB8Q3ZCM7 444 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PLEKHN1Q494U1 663 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 YOD1Q5VVQ6 348 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 GARNL3Q5VVW2 1013 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 SLC6A19Q695T7 634 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 TCTN3Q6NUS6 607 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 GTF2H2CQ6P1K8 395 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PRMT9Q6P2P2 845 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 TMEM205Q6UW68 189 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 TMIGD1Q6UXZ0 262 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ATG14Q6ZNE5 492 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 C16orf47Q6ZP98 133 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 LINC00696Q6ZRV3 163 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 SH2D5Q6ZV89 423 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ANKRD37Q7Z713 158 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 CLNKQ7Z7G1 428 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 MYLK4Q86YV6 388 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 MMP21Q8N119 569 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ZNF321PQ8N8H1 164 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 LSM14AQ8ND56 463 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 STAG3L4Q8TBR4 150 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 BRIX1Q8TDN6 353 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 ZNF473Q8WTR7 871 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 WDR34Q96EX3 536 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PTCD3Q96EY7 689 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 THOC3Q96J01 351 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 MTERF1Q99551 399 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 MAPKAP1Q9BPZ7 522 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 C17orf62Q9BQA9 187 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 AIF1LQ9BQI0 150 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 ADNPQ9H2P0 1102 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 NOL11Q9H8H0 719 aaKnown RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 ANKHQ9HCJ1 492 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 MKKSQ9NPJ1 570 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 SEMA4BQ9NPR2 832 aaPredicted RBP6.21□□□□□ -1.42
SMC6-205ENST00000430591 PTGFRNQ9P2B2 879 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 OPTCQ9UBM4 332 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PCTPQ9UKL6 214 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 PADI2Q9Y2J8 665 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 KCNE2Q9Y6J6 123 aa6.21□□□□□ -1.42
SMC6-205ENST00000430591 LOC102723996A0A087X1L8 192 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 LRIT2A6NDA9 550 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 MAGEB17A8MXT2 336 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 HMGB1P1B2RPK0 211 aaPredicted RBP6.2□□□□□ -1.42
SMC6-205ENST00000430591 PEX12O00623 359 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 ZNHIT1O43257 154 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 DLX3O60479 287 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 EEDO75530 441 aaKnown RBP6.2□□□□□ -1.42
SMC6-205ENST00000430591 SORBS2O94875 1100 aaKnown RBP6.2□□□□□ -1.42
SMC6-205ENST00000430591 S100BP04271 92 aaPredicted RBP6.2□□□□□ -1.42
SMC6-205ENST00000430591 TUBB4AP04350 444 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 FHP07954 510 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 SNRPAP09012 282 aaKnown RBP6.2□□□□□ -1.42
SMC6-205ENST00000430591 SLC35G6P0C7Q6 338 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 PRR35P0CG20 571 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 RNF224P0DH78 156 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 GNAZP19086 355 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 HRH2P25021 359 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 GRK3P35626 688 aa6.2□□□□□ -1.42
SMC6-205ENST00000430591 AHRP35869 848 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms