RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 NR6A1Q15406 480 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 NDUFA9Q16795 377 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 UNC50Q53HI1 259 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 XKR6Q5GH73 641 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 B3GNTL1Q67FW5 361 aaPredicted RBP15.98■□□□□ 0.15
UBE3D-204ENST00000430071 HIST2H2BCQ6DN03 193 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 NDUFAF7Q7L592 441 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 SLC22A9Q8IVM8 553 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 OR51Q1Q8NH59 317 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 DNAJB14Q8TBM8 379 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 L3HYPDHQ96EM0 354 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 WDR34Q96EX3 536 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 WDR77Q9BQA1 342 aaPredicted RBP15.98■□□□□ 0.15
UBE3D-204ENST00000430071 SARGQ9BW04 601 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 RBCK1Q9BYM8 510 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 AICDAQ9GZX7 198 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 EHD1Q9H4M9 534 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 IPPKQ9H8X2 491 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 C14orf105Q9NVL8 296 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 PTGFRNQ9P2B2 879 aa15.98■□□□□ 0.15
UBE3D-204ENST00000430071 CROCCQ5TZA2 2017 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 LOC102723996A0A087X1L8 192 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 NSG1A0A0A6YYJ2 146 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 A0A1W2PQ72 361 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 TRBC2A0A5B9 178 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 C4orf51C9J302 202 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 PRPF4O43172 522 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBE3D-204ENST00000430071 OR1F1O43749 312 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 WFS1O76024 890 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 TSPAN8P19075 237 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CASP2P42575 452 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 XCR1P46094 333 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 AVPR1BP47901 424 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 PIK3CGP48736 1102 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CDH13P55290 713 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 OLR1P78380 273 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 IRF8Q02556 426 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CHIT1Q13231 466 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 E2F2Q14209 437 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 TTMPQ5BVD1 217 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 AGBL2Q5U5Z8 902 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 C10orf107Q8IVU9 208 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 ANKRD53Q8N9V6 530 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CAMKVQ8NCB2 501 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 OR52B6Q8NGF0 335 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 PPP4R1Q8TF05 950 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CCDC126Q96EE4 140 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 THAP11Q96EK4 314 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 PTCD3Q96EY7 689 aaKnown RBP15.97■□□□□ 0.15
UBE3D-204ENST00000430071 CNDP1Q96KN2 507 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 IMMP1LQ96LU5 166 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 AIF1LQ9BQI0 150 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 MECRQ9BV79 373 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 ZNF700Q9H0M5 742 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 NOL11Q9H8H0 719 aaKnown RBP15.97■□□□□ 0.15
UBE3D-204ENST00000430071 OXSMQ9NWU1 459 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 MID2Q9UJV3 735 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 NAALAD2Q9Y3Q0 740 aa15.97■□□□□ 0.15
UBE3D-204ENST00000430071 DOPEY1Q5JWR5 2465 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 A0A1B0GTL3 188 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 H0YIG0 161 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 PPP6CO00743 305 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SEC24DO94855 1032 aaPredicted RBP15.96■□□□□ 0.15
UBE3D-204ENST00000430071 CBX6O95503 412 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SERPIND1P05546 499 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 CXCR2P25025 360 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 ALDH3A1P30838 453 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 GRK3P35626 688 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SOX11P35716 441 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SCTRP47872 440 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 DNAJB13P59910 316 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SRSF11Q05519 484 aaKnown RBP15.96■□□□□ 0.15
UBE3D-204ENST00000430071 TBCCQ15814 346 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 MFSD4BQ5TF39 518 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 ISLR2Q6UXK2 745 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 KBTBD2Q8IY47 623 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 ATP6V1G3Q96LB4 118 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 PSMG3-AS1Q96PY0 264 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 GSTO2Q9H4Y5 243 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 KLHL31Q9H511 634 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 KCNK9Q9NPC2 374 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 SEMA4BQ9NPR2 832 aaPredicted RBP15.96■□□□□ 0.15
UBE3D-204ENST00000430071 ZNF490Q9ULM2 529 aaPredicted RBP15.96■□□□□ 0.15
UBE3D-204ENST00000430071 COPG1Q9Y678 874 aaKnown RBP15.96■□□□□ 0.15
UBE3D-204ENST00000430071 CENPEQ02224 2701 aa15.96■□□□□ 0.15
UBE3D-204ENST00000430071 H2AFYO75367 372 aaKnown RBP15.95■□□□□ 0.14
UBE3D-204ENST00000430071 CDC123O75794 336 aaPredicted RBP15.95■□□□□ 0.14
UBE3D-204ENST00000430071 SUPT7LO94864 414 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 NAGLUP54802 743 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 HYAL2Q12891 473 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 TRAF3Q13114 568 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 MFAP5Q13361 173 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 MINDY4Q4G0A6 757 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 ADNP2Q6IQ32 1131 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 TMIGD1Q6UXZ0 262 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 AFAP1L2Q8N4X5 818 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 CCNYL1Q8N7R7 359 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 PRR7Q8TB68 274 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 TRPC4APQ8TEL6 797 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 PEX11GQ96HA9 241 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms