RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ACADLP28330 430 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GABRR2P28476 465 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CDC25CP30307 473 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ARL2P36404 184 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TUFMP49411 452 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TUBB2AQ13885 445 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SLMAPQ14BN4 828 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 PDGFRLQ15198 375 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 MED22Q15528 200 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TSTQ16762 297 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 MEP1AQ16819 746 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 DCAF4L1Q3SXM0 396 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GALNT17Q6IS24 598 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZNF534Q76KX8 674 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 DNAJB7Q7Z6W7 309 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CDR2LQ86X02 465 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CEP97Q8IW35 865 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 HJURPQ8NCD3 748 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRPC4APQ8TEL6 797 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ARHGEF2Q92974 986 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 RSRC1Q96IZ7 334 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CNOT6LQ96LI5 555 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 NUDCD1Q96RS6 583 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ATOH8Q96SQ7 321 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 P2RY13Q9BPV8 354 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 LXNQ9BS40 222 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 PI4K2AQ9BTU6 479 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TUBB2BQ9BVA1 445 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GTPBP2Q9BX10 602 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 LRRC2Q9BYS8 371 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRIM7Q9C029 511 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 FZD8Q9H461 694 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 PELI2Q9HAT8 420 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ANKEF1Q9NU02 776 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZNHIT6Q9NWK9 470 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 C6orf203Q9P0P8 240 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 DDX25Q9UHL0 483 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SMAD5-AS1Q9Y6J3 95 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 MYO18AQ92614 2054 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SPTA1P02549 2419 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 DENND4CQ5VZ89 1909 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ARID2Q68CP9 1835 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 LRRIQ4A6NIV6 560 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 PLK4O00444 970 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 OGG1O15527 345 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 B4GALT5O43286 388 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GPC4O75487 556 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 RTN3O95197 1032 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCNDBP1O95273 360 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GNSP15586 552 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 CKMT2P17540 419 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 NFKBIAP25963 317 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 HOXC13P31276 330 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 BRCC3P46736 316 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GPR143P51810 404 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 MNAT1P51948 309 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GSCP56915 257 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 NUCB2P80303 420 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 YWHAHQ04917 246 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 BFSP1Q12934 665 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GPR17Q13304 367 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 MFAP5Q13361 173 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 NECTIN1Q15223 517 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZSCAN23Q3MJ62 389 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZDHHC20Q5W0Z9 365 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 LYSMD4Q5XG99 296 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCDC80Q76M96 950 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GLRX5Q86SX6 157 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 PLD3Q8IV08 490 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 CMTM8Q8IZV2 173 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 PSMG2Q969U7 264 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 C1orf74Q96LT6 269 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 LRRC3BQ96PB8 259 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 FAM124BQ9H5Z6 455 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 XPNPEP1Q9NQW7 623 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 COQ3Q9NZJ6 369 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 PILRBQ9UKJ0 227 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 GTF2A1LQ9UNN4 478 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 PTPRDP23468 1912 aa4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 TNRC6BQ9UPQ9 1833 aaKnown RBP4.3□□□□□ -1.72
HMGB3P5-201ENST00000428894 COL6A6A6NMZ7 2263 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 PLXND1Q9Y4D7 1925 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 MYO16Q9Y6X6 1858 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 KLF18A0A0U1RQI7 1052 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 SMIM28A0A1B0GU29 152 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRABD2BA6NFA1 517 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 I3L4J1 428 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 SCAMP1O15126 338 aa4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 RRP8O43159 456 aaKnown RBP4.29□□□□□ -1.72
HMGB3P5-201ENST00000428894 E2F6O75461 281 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms