RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DCAF12Q5T6F0 453 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARHGAP40Q5TG30 622 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 NIPAL1Q6NVV3 410 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 CEACAM20Q6UY09 585 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 RIPOR1Q6ZS17 1223 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MTDHQ86UE4 582 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 BPHLQ86WA6 291 aaPredicted RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MARCH9Q86YJ5 346 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM9CQ8IZT9 166 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MIER2Q8N344 545 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GALNT15Q8N3T1 639 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZCCHC7Q8N3Z6 543 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARHGEF39Q8N4T4 335 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 AMER3Q8N944 861 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR5T3Q8NGG3 340 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 WDR36Q8NI36 951 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ADAMTS14Q8WXS8 1223 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GFM2Q969S9 779 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 COL26A1Q96A83 441 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MMABQ96EY8 250 aaPredicted RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC45A3Q96JT2 553 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FCRL1Q96LA6 429 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZBTB18Q99592 522 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 DDA1Q9BW61 102 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 RBCK1Q9BYM8 510 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ULBP3Q9BZM4 244 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 NMUR2Q9GZQ4 415 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MYNNQ9NPC7 610 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MIEF1Q9NQG6 463 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRDM7Q9NQW5 492 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FBXO8Q9NRD0 319 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 LYARQ9NX58 379 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SIRT5Q9NXA8 310 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 BAIAP2L1Q9UHR4 511 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FBXW2Q9UKT8 454 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 CDC14AQ9UNH5 594 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SATB2Q9UPW6 733 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 PCDHB3Q9Y5E6 796 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 CAPN7Q9Y6W3 813 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAU2Q9Y6X3 613 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SPACA6W5XKT8 324 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 DMXL1Q9Y485 3027 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 DNAH14Q0VDD8 3507 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ANKRD12Q6UB98 2062 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 C9JVG2 144 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 PSMD12O00232 456 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 NR5A2O00482 541 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 FOXS1O43638 330 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 KIAA0754O94854 1291 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TNFSF15O95150 251 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 SCELO95171 688 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 NSA2O95478 260 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 IL3P08700 152 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 NR2F6P10588 404 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 RNH1P13489 461 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 BUD31P41223 144 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR1D4P47884 311 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ATP4BP51164 291 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLNS1AP54105 237 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 HNRNPH2P55795 449 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 GABREP78334 506 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 IRX1P78414 480 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAT1AQ00266 395 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 FOXK2Q01167 660 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TNFRSF17Q02223 184 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLC1Q07866 573 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 DSG2Q14126 1118 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 PDCD4Q53EL6 469 aaKnown RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 NDUFAF5Q5TEU4 345 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 RHBDD2Q6NTF9 364 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRMT9Q6P2P2 845 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 IKBIPQ70UQ0 350 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 GPR180Q86V85 440 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMEM132CQ8N3T6 1108 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM47BQ8NA70 645 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR9I1Q8NGQ6 314 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 PROKR1Q8TCW9 393 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ADAMTS18Q8TE60 1221 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 C16orf78Q8WTQ4 265 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 STARD8Q92502 1023 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ERP27Q96DN0 273 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 MVB12AQ96EY5 273 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 C11orf24Q96F05 449 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 LRRC37BQ96QE4 947 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAIM2Q9BWQ8 316 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASPSCR1Q9BZE9 553 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 DPY30Q9C005 99 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 BRINP2Q9C0B6 783 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 WDR41Q9HAD4 459 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 LYRM4Q9HD34 91 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 SAR1AQ9NR31 198 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 SDR39U1Q9NRG7 319 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ENAMQ9NRM1 1142 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 MRGBPQ9NV56 204 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 TEX10Q9NXF1 929 aaPredicted RBP7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 DLL3Q9NYJ7 618 aa7.49□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARMCX1Q9P291 453 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms