RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PITHD1Q9GZP4 211 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-202ENST00000427943 COPS7BQ9H9Q2 264 aaPredicted RBP17.23■□□□□ 0.35
PSPC1-202ENST00000427943 NMRAL1Q9HBL8 299 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 MMACHCQ9Y4U1 282 aa17.23■□□□□ 0.35
PSPC1-202ENST00000427943 A0A088AWK7 358 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 TGFBR3LH3BV60 316 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 B3GALT2O43825 422 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 KERAO60938 352 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 UNC5CO95185 931 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 ZNF10P21506 573 aaPredicted RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 TPP2P29144 1249 aaPredicted RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 CRABP2P29373 138 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 PPP2R1BP30154 601 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 MSH2P43246 934 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 ADPRMQ3LIE5 342 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 MROH9Q5TGP6 573 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 ZNF468Q5VIY5 522 aaPredicted RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 FJX1Q86VR8 437 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 RPS19BP1Q86WX3 136 aaKnown RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 SCUBE1Q8IWY4 988 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 NFAM1Q8NET5 270 aaPredicted RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 SEC16BQ96JE7 1060 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 F2RL3Q96RI0 385 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 NPLQ9BXD5 320 aaPredicted RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 PRTFDC1Q9NRG1 225 aa17.22■□□□□ 0.35
PSPC1-202ENST00000427943 PNO1Q9NRX1 252 aaKnown RBP17.22■□□□□ 0.35
PSPC1-202ENST00000427943 UNC79Q9P2D8 2635 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SH3BGRLO75368 114 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 WISP2O76076 250 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 MYO1DO94832 1006 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 STSP08842 583 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 PER3P56645 1201 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SLC13A2Q13183 592 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 PAGE2BQ5JRK9 111 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 ABHD17CQ6PCB6 329 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 CLNKQ7Z7G1 428 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 CENPLQ8N0S6 344 aaPredicted RBP17.21■□□□□ 0.35
PSPC1-202ENST00000427943 LGI4Q8N135 537 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 ZNF592Q92610 1267 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SCMH1Q96GD3 660 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SERINC2Q96SA4 455 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SNX15Q9NRS6 342 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 NINJ2Q9NZG7 142 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 LRFN1Q9P244 771 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 OPTCQ9UBM4 332 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 SEC14L3Q9UDX4 400 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 ACOT9Q9Y305 439 aa17.21■□□□□ 0.35
PSPC1-202ENST00000427943 TRBV11-1A0A0K0K1C0 115 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 MYOCOSA0A1B0GUC4 107 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 HMX2A2RU54 273 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 K7EPI3 171 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 ZG16O60844 167 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 NEURL1O76050 574 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 PCNAP12004 261 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 CD46P15529 392 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 EEF1DP29692 281 aaKnown RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 MTTPP55157 894 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 LIM2P55344 173 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 LAPTM5Q13571 262 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 HIST2H2ACQ16777 129 aaPredicted RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF787Q6DD87 383 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 HIST2H2AA3Q6FI13 130 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 GALNTL5Q7Z4T8 443 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 APCDD1LQ8NCL9 501 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 THAP3Q8WTV1 239 aaPredicted RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 UBTD2Q8WUN7 234 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 MS4A8Q9BY19 250 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 TSPAN10Q9H1Z9 355 aaPredicted RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 MRPS33Q9Y291 106 aaKnown RBP17.2■□□□□ 0.34
PSPC1-202ENST00000427943 PCDHGB6Q9Y5F9 930 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 CLDN16Q9Y5I7 305 aa17.2■□□□□ 0.34
PSPC1-202ENST00000427943 EML6Q6ZMW3 1958 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 A0A087X1B8 175 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
PSPC1-202ENST00000427943 CLDN4O14493 209 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 C2P06681 752 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 MTHFD2P13995 350 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 HSD17B7P56937 341 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 MLF1P58340 268 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 TBCCQ15814 346 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 WHAMMP3Q1A5X7 153 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 CRYBG3Q68DQ2 2970 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF793Q6ZN11 406 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 RNF175Q8N4F7 328 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 TMEM178AQ8NBL3 297 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 B3GNT7Q8NFL0 401 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 ADAMTS18Q8TE60 1221 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 ZNF473Q8WTR7 871 aaKnown RBP17.19■□□□□ 0.34
PSPC1-202ENST00000427943 FRMD6Q96NE9 622 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 DEFB126Q9BYW3 111 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 SH3BGRL2Q9UJC5 107 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 DAPP1Q9UN19 280 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 CACNA1DQ01668 2161 aa17.19■□□□□ 0.34
PSPC1-202ENST00000427943 A0A096LPK6 155 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 TRGV8A0A0C4DH27 118 aa17.18■□□□□ 0.34
PSPC1-202ENST00000427943 A0A1B0GUH1 482 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms