RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 FHL5Q5TD97 284 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ABHD17BQ5VST6 288 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF324BQ6AW86 544 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 MED27Q6P2C8 311 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 CRLF3Q8IUI8 442 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 BEST3Q8N1M1 668 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 TMEM151AQ8N4L1 468 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 KIF2BQ8N4N8 673 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 FAR1Q8WVX9 515 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF354BQ96LW1 612 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 MAGEB10Q96LZ2 347 aaPredicted RBP17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 SERINC2Q96SA4 455 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 CSF3RQ99062 836 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 SLC29A3Q9BZD2 475 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 DAPP1Q9UN19 280 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 MMACHCQ9Y4U1 282 aa17.18■□□□□ 0.34
SMARCAL1-205ENST00000425815 A0A087WUV0 522 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 TRAV17A0A0B4J275 112 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 OR5H15A6NDH6 313 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 A8MUA0 341 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 RTCAO00442 366 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 B3GALT2O43825 422 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 RNF224P0DH78 156 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 GFAPP14136 432 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 MTTPP55157 894 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 GRHL2Q6ISB3 625 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 TRIM40Q6P9F5 258 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 IFT20Q8IY31 132 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 CYP4X1Q8N118 509 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 PRR7Q8TB68 274 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 PSMG3-AS1Q96PY0 264 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 HECTD1Q9ULT8 2610 aa17.17■□□□□ 0.34
SMARCAL1-205ENST00000425815 SAGE2PA6NJ88 616 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 SH3BGRLO75368 114 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 ABHD2P08910 425 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 SBK3P0C264 359 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 PCNAP12004 261 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 ATP5A1P25705 553 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 PPP2R1BP30154 601 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 CD96P40200 585 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 KLC3Q6P597 504 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 GOLGA7Q7Z5G4 137 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 ST6GALNAC3Q8NDV1 305 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 HUS1BQ8NHY5 278 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 UBE2E3Q969T4 207 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 EPB41L4BQ9H329 900 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 OR51B5Q9H339 312 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 CDCP1Q9H5V8 836 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 PRTFDC1Q9NRG1 225 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 AGPAT4Q9NRZ5 378 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 CPSF2Q9P2I0 782 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 TEKT2Q9UIF3 430 aa17.16■□□□□ 0.34
SMARCAL1-205ENST00000425815 USP9XQ93008 2570 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 A0A088AWK7 358 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ANKUB1A6NFN9 424 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 SAP18O00422 153 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 OR7A17O14581 309 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 RIPK2O43353 540 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 PRAMEF2O60811 474 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 KRT38O76015 456 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 WISP2O76076 250 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 RBP1P09455 135 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF10P21506 573 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 CNTFP26441 200 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 HPDP32754 393 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 GPR143P51810 404 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 HSD17B7P56937 341 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 SRSF11Q05519 484 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TUBA3CQ13748 450 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 GTF2H2Q13888 395 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 MEP1AQ16819 746 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TMEM35AQ53FP2 167 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ZNF468Q5VIY5 522 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 LIPJQ5W064 366 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 GTF2H2CQ6P1K8 395 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TUBA3EQ6PEY2 450 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ADGRD1Q6QNK2 874 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 PTGR2Q8N8N7 351 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ACOT4Q8N9L9 421 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 L3MBTL4Q8NA19 623 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 APCDD1LQ8NCL9 501 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TRIM44Q96DX7 344 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 PHF21BQ96EK2 531 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 SIGLEC12Q96PQ1 595 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 KCNC2Q96PR1 638 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 MAPKAP1Q9BPZ7 522 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TBCDQ9BTW9 1192 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 SORBS1Q9BX66 1292 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 IPPKQ9H8X2 491 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 ANKRD10Q9NXR5 420 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 RNF11Q9Y3C5 154 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 TNPO3Q9Y5L0 923 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms