RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 PCNAP12004 261 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 MAOAP21397 527 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF10P21506 573 aaPredicted RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 CERS1P27544 350 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 EEF1DP29692 281 aaKnown RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 PIK3CBP42338 1070 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 PIK3CGP48736 1102 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 HNRNPFP52597 415 aaKnown RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 LIM2P55344 173 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 TGM3Q08188 693 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 EXT1Q16394 746 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 BTBD16Q32M84 506 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 TMEM35AQ53FP2 167 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 RNF175Q8N4F7 328 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 SRFBP1Q8NEF9 429 aaKnown RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 HUS1BQ8NHY5 278 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 HAS2Q92819 552 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 SNRNP40Q96DI7 357 aaKnown RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 CMTM7Q96FZ5 175 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 KCNC2Q96PR1 638 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 BARD1Q99728 777 aaKnown RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 TBCDQ9BTW9 1192 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 ACTR8Q9H981 624 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 MMP25Q9NPA2 562 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 TMEM216Q9P0N5 145 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 PSMC3IPQ9P2W1 217 aaPredicted RBP16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 PCTPQ9UKL6 214 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 RNF11Q9Y3C5 154 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 MMACHCQ9Y4U1 282 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 PCDHGA11Q9Y5H2 935 aa16.8■□□□□ 0.28
IGHV3-47-201ENST00000425060 IQANK1A0A1B0GTG1 560 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 TGFBR3LH3BV60 316 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 RTCAO00442 366 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 SMIM24O75264 130 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 RPS17P08708 135 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ATP5A1P25705 553 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 SLC26A5P58743 744 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ACTN3Q08043 901 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 KHDRBS2Q5VWX1 349 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 CHSY3Q70JA7 882 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 IQCKQ8N0W5 287 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 CATSPER1Q8NEC5 780 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 NFAM1Q8NET5 270 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 OR52B6Q8NGF0 335 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 WDR20Q8TBZ3 569 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ACMSDQ8TDX5 336 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ADAMTS18Q8TE60 1221 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 C19orf60Q96EN9 201 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 NSUN5Q96P11 429 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 NPAS2Q99743 824 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 NTMT1Q9BV86 223 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 C1QTNF3Q9BXJ4 246 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ROGDIQ9GZN7 287 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 RNF32Q9H0A6 362 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 ILKAPQ9H0C8 392 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 OR51B5Q9H339 312 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 DMRT3Q9NQL9 472 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 PSD3Q9NYI0 1048 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 PLA2G3Q9NZ20 509 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 CPAMD8Q8IZJ3 1885 aa16.79■□□□□ 0.28
IGHV3-47-201ENST00000425060 SH3BGRLO75368 114 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 CLDN9O95484 217 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 SHBGP04278 402 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 TSFMP43897 325 aaKnown RBP16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 HSD17B7P56937 341 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 TRAF3Q13114 568 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 TLR1Q15399 786 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 SH2D5Q6ZV89 423 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 LCA5Q86VQ0 697 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 CNPY4Q8N129 248 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 CISD2Q8N5K1 135 aaKnown RBP16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 ACOT4Q8N9L9 421 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 GALNT11Q8NCW6 608 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 ELP5Q8TE02 316 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 CSF3RQ99062 836 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 MTERF1Q99551 399 aaKnown RBP16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 LYRM4Q9HD34 91 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 PRTFDC1Q9NRG1 225 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 NTNG1Q9Y2I2 539 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 RELNP78509 3460 aa16.78■□□□□ 0.28
IGHV3-47-201ENST00000425060 CLEC18AA5D8T8 446 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 A8MT66 165 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 WDPCPO95876 746 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 HIST1H1TP22492 207 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 TNFSF10P50591 281 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ARFIP1P53367 373 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 RPS13P62277 151 aaKnown RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZRSR2Q15696 482 aaKnown RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 CPSF6Q16630 551 aaKnown RBP eCLIP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 OR4C11Q6IEV9 310 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 CLEC18BQ6UXF7 455 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 TDRPQ86YL5 185 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 MYLK4Q86YV6 388 aaPredicted RBP16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 ZNF595Q8IYB9 648 aa16.77■□□□□ 0.28
IGHV3-47-201ENST00000425060 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms