RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GALR3O60755 368 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 STK16O75716 305 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 KRT38O76015 456 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 ALDOAP04075 364 aaKnown RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 C1GALT1C1LP0DN25 315 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 GFAPP14136 432 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 GNAZP19086 355 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 SLC6A12P48065 614 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 KCNC1P48547 511 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 SERPINB9P50453 376 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 SLC26A5P58743 744 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 REEP5Q00765 189 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 RGS1Q08116 209 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
VRK3-203ENST00000424804 XKR6Q5GH73 641 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 KLC3Q6P597 504 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 FGD2Q7Z6J4 655 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 ISCA2Q86U28 154 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 ZNF295-AS1Q8N0V1 137 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 ZNF808Q8N4W9 903 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 THAP3Q8WTV1 239 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 GPR137Q96N19 417 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 FRMD6Q96NE9 622 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 OR1F2PQ96R84 312 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 KCNK13Q9HB14 408 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 NUDT4Q9NZJ9 180 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 CPSF2Q9P2I0 782 aaKnown RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 C19orf25Q9UFG5 118 aaPredicted RBP12.16□□□□□ -0.46
VRK3-203ENST00000424804 ANGPTL3Q9Y5C1 460 aa12.16□□□□□ -0.46
VRK3-203ENST00000424804 CELSR1Q9NYQ6 3014 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 IGKV3D-11A0A0A0MRZ8 115 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 C19orf84I3L1E1 186 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ADAM10O14672 748 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 RIPK2O43353 540 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 CHST10O43529 356 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 SLC19A2O60779 497 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 KERAO60938 352 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 CDC123O75794 336 aaPredicted RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 UQCRHP07919 91 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ZNF888P0CJ79 500 aaPredicted RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 IL10P22301 178 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 HTR1EP28566 365 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 SCTRP47872 440 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 RAB8AP61006 207 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 OLR1P78380 273 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 BTG2P78543 158 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 PWP1Q13610 501 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 OR1C1Q15619 314 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 NSDHLQ15738 373 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 EXT1Q16394 746 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 PDK4Q16654 411 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 MEP1AQ16819 746 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.15□□□□□ -0.46
VRK3-203ENST00000424804 TOR1AIP1Q5JTV8 583 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 NCCRP1Q6ZVX7 275 aaPredicted RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 TRMT10CQ7L0Y3 403 aaKnown RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 ARMC10Q8N2F6 343 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ANKRD53Q8N9V6 530 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 PDPRQ8NCN5 879 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 UTP15Q8TED0 518 aaKnown RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 UBLCP1Q8WVY7 318 aaPredicted RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 ATOH8Q96SQ7 321 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 FUT8Q9BYC5 575 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 CD244Q9BZW8 370 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 KLHL31Q9H511 634 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
VRK3-203ENST00000424804 KLHL1Q9NR64 748 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ZNF358Q9NW07 568 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 OPTCQ9UBM4 332 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 TEKT2Q9UIF3 430 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 TINAGQ9UJW2 476 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 CLDN16Q9Y5I7 305 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 F8P00451 2351 aa12.15□□□□□ -0.46
VRK3-203ENST00000424804 HIVEP1P15822 2718 aa12.15□□□□□ -0.47
VRK3-203ENST00000424804 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 A0A0G2JN53 185 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 GABRR3A8MPY1 467 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 SYCE1LA8MT33 242 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 KLHL2O95198 593 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 FHP07954 510 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 SP1P08047 785 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 MYBL2P10244 700 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 ALOX12P18054 663 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 ARL1P40616 181 aaPredicted RBP12.14□□□□□ -0.47
VRK3-203ENST00000424804 IRF8Q02556 426 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 SLC29A2Q14542 456 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 HERC3Q15034 1050 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 PFKFB4Q16877 469 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 DEFB134Q4QY38 66 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 SLCO4C1Q6ZQN7 724 aa12.14□□□□□ -0.47
VRK3-203ENST00000424804 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms