RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 NXPE4Q6UWF7 544 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 CRLF3Q8IUI8 442 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 SRRM1Q8IYB3 904 aaKnown RBP15.18■□□□□ 0.02
DDR1-234ENST00000424544 KLHDC8AQ8IYD2 350 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 BEST3Q8N1M1 668 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 TSLPQ969D9 159 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 SMC6Q96SB8 1091 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 SLC22A14Q9Y267 594 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 ACTL7BQ9Y614 415 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 PCNX1Q96RV3 2341 aa15.18■□□□□ 0.02
DDR1-234ENST00000424544 ASPDHA6ND91 283 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 ZNF860A6NHJ4 632 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 ZG16O60844 167 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 KLHL2O95198 593 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
DDR1-234ENST00000424544 CCT5P48643 541 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 PER3P56645 1201 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 SLC26A5P58743 744 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 MEP1AQ16819 746 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 MFSD4BQ5TF39 518 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 FCRLBQ6BAA4 426 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 QSOX2Q6ZRP7 698 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 LCA5Q86VQ0 697 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 TICAM1Q8IUC6 712 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 SLC34A3Q8N130 599 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 LGI4Q8N135 537 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 C4orf33Q8N1A6 199 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 ARMC10Q8N2F6 343 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 NXNL1Q96CM4 212 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 TLCD1Q96CP7 247 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 SCMH1Q96GD3 660 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 ATP6V1G3Q96LB4 118 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 MAGEB10Q96LZ2 347 aaPredicted RBP15.17■□□□□ 0.02
DDR1-234ENST00000424544 TSNARE1Q96NA8 513 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 SIGLEC12Q96PQ1 595 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 LPAR4Q99677 370 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 KLHL31Q9H511 634 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 TRIM45Q9H8W5 580 aaPredicted RBP15.17■□□□□ 0.02
DDR1-234ENST00000424544 KCNK13Q9HB14 408 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 NMRAL1Q9HBL8 299 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 COPG2Q9UBF2 871 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 KCNE2Q9Y6J6 123 aa15.17■□□□□ 0.02
DDR1-234ENST00000424544 IGKV3D-11A0A0A0MRZ8 115 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 COPEO14579 308 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 CDC123O75794 336 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 TBX6O95947 436 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 SERPINA6P08185 405 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 GSTA1P08263 222 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 CD1DP15813 335 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 CREB1P16220 341 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 GMPRP36959 345 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 SLC6A12P48065 614 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 HNMTP50135 292 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 MAGOHP61326 146 aaKnown RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 ATP6V0D1P61421 351 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 OLR1P78380 273 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 IRF9Q00978 393 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 SRSF11Q05519 484 aaKnown RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 ACTN3Q08043 901 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 RGS1Q08116 209 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 DLG1Q12959 904 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 FAM83EQ2M2I3 478 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.16■□□□□ 0.02
DDR1-234ENST00000424544 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 ZNF766Q5HY98 468 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 SPINK14Q6IE38 97 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 GFRALQ6UXV0 394 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 FJX1Q86VR8 437 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 ZNF227Q86WZ6 799 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 CENPLQ8N0S6 344 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 PLD6Q8N2A8 252 aaKnown RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 SPATA6LQ8N4H0 392 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 TBC1D19Q8N5T2 526 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 BANPQ8N9N5 519 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 NFAM1Q8NET5 270 aaPredicted RBP15.16■□□□□ 0.02
DDR1-234ENST00000424544 TRPV3Q8NET8 790 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 KCTD4Q8WVF5 259 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 RHBDF1Q96CC6 855 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 DERL2Q9GZP9 239 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 IGSF5Q9NSI5 407 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 OARD1Q9Y530 152 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 CLDN16Q9Y5I7 305 aa15.16■□□□□ 0.02
DDR1-234ENST00000424544 C4orf51C9J302 202 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 NEURL1O76050 574 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 ZNF888P0CJ79 500 aaPredicted RBP15.15■□□□□ 0.02
DDR1-234ENST00000424544 CRHR1P34998 444 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 GGT5P36269 586 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 SKP1P63208 163 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 BTG2P78543 158 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 ACAP2Q15057 778 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 TSNAXIP1Q2TAA8 658 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 TTMPQ5BVD1 217 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 C1QL3Q5VWW1 255 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 SLCO4C1Q6ZQN7 724 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 ABHD13Q7L211 337 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 SUN3Q8TAQ9 357 aa15.15■□□□□ 0.02
DDR1-234ENST00000424544 THAP3Q8WTV1 239 aaPredicted RBP15.15■□□□□ 0.02
DDR1-234ENST00000424544 GPR78Q96P69 363 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms