RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PRDM9Q9NQV7 894 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 LANCL2Q9NS86 450 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 DNAJC11Q9NVH1 559 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SPATA7Q9P0W8 599 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SAE1Q9UBE0 346 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 MYOTQ9UBF9 498 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 GDF2Q9UK05 429 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-203ENST00000424270 MAPRE3Q9UPY8 281 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 SLC6A5Q9Y345 797 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ATG4BQ9Y4P1 393 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 NBEAL2Q6ZNJ1 2754 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 DNAJC13O75165 2243 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF407Q9C0G0 2248 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 DSCAMO60469 2012 aa5.79□□□□□ -1.48
SDCBP-203ENST00000424270 ABCA1O95477 2261 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 USF3Q68DE3 2245 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF839A8K0R7 811 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 H7BY64 318 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CHST10O43529 356 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 KIF5CO60282 957 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 RGS9O75916 674 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ANXA9O76027 345 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 LRATO95237 230 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 C1orf105O95561 183 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SYF2O95926 243 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 PLAUP00749 431 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 IFNA16P05015 189 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CYP1A2P05177 515 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 IGHV4-31P0DP07 118 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZFXP17010 805 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CCR7P32248 378 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 UGT2B10P36537 528 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 MASP1P48740 699 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CCR8P51685 355 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF140P52738 457 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 DSCR9P59020 149 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 RPS15AP62244 130 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CRYZQ08257 329 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 GAB1Q13480 694 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ITIH4Q14624 930 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 HERC3Q15034 1050 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 EXOC3L2Q2M3D2 409 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 DEFB134Q4QY38 66 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SLC22A10Q63ZE4 541 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 PTRHD1Q6GMV3 140 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 TMEM214Q6NUQ4 689 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 BRICD5Q6PL45 260 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SCIMPQ6UWF3 145 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SEZ6L2Q6UXD5 910 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 HSDL2Q6YN16 418 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SH2D5Q6ZV89 423 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 MICALCLQ6ZW33 695 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ASPGQ86U10 573 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 GRAMD2AQ8IUY3 354 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ELOA2Q8IYF1 753 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ARMC10Q8N2F6 343 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 LRRC17Q8N6Y2 441 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 KCT2Q8NC54 265 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 APCDD1LQ8NCL9 501 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 NFAM1Q8NET5 270 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SLC44A1Q8WWI5 657 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 FBXW5Q969U6 566 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 REPS1Q96D71 796 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ADAD1Q96M93 576 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZFP3Q96NJ6 502 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 RUNDC3BQ96NL0 473 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 PRAP1Q96NZ9 151 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 RNF157Q96PX1 679 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 FCRL5Q96RD9 977 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 DOHHQ9BU89 302 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF696Q9H7X3 374 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SYNPO2LQ9H987 977 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ACKR4Q9NPB9 350 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 EIF2B3Q9NR50 452 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ARMCX1Q9P291 453 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF148Q9UQR1 794 aa5.78□□□□□ -1.48
SDCBP-203ENST00000424270 MAGED1Q9Y5V3 778 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 SNRNP200O75643 2136 aaKnown RBP5.78□□□□□ -1.48
SDCBP-203ENST00000424270 CR1P17927 2039 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 A0A1W2PPV9 198 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TCRBV16S1A1N1A0A5B0 115 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SYCE3A1L190 88 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SLC35F4A4IF30 521 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 IQCF5A8MTL0 148 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 MSTNO14793 375 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 KPNA5O15131 536 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TMPRSS2O15393 492 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 PRKNO60260 465 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 OR1I1O60431 355 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 NDUFS7O75251 213 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 ACSL3O95573 720 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TGFAP01135 160 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 FESP07332 822 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 SLC25A16P16260 332 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 TNNI3P19429 210 aa5.77□□□□□ -1.49
SDCBP-203ENST00000424270 MSNP26038 577 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 EEF1GP26641 437 aaKnown RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 CD68P34810 354 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-203ENST00000424270 GRK3P35626 688 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms