RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FAM47BQ8NA70 645 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 APCDD1LQ8NCL9 501 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 CREB3L4Q8TEY5 395 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 ANKRD7Q92527 254 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 SMIM10Q96HG1 83 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 RUNDC3BQ96NL0 473 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 DMRTA2Q96SC8 542 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 WDR83Q9BRX9 315 aaKnown RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 NPLQ9BXD5 320 aaPredicted RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 COPS7BQ9H9Q2 264 aaPredicted RBP15.07■□□□□ 0
COL18A1-205ENST00000423214 PRTFDC1Q9NRG1 225 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 ITGB1BP2Q9UKP3 347 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 ASB1Q9Y576 335 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 PSAT1Q9Y617 370 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 TEX264Q9Y6I9 313 aa15.07■□□□□ 0
COL18A1-205ENST00000423214 AKAP9Q99996 3911 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 A0A1B0GTH9 108 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 SYNDIG1LA6NDD5 238 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 NCF1BA6NI72 391 aaPredicted RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 NCF1CA8MVU1 366 aaPredicted RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 CCDC188H7C350 402 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 B3GALT2O43825 422 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 PEX1O43933 1283 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 HS6ST1O60243 411 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 C1GALT1C1LP0DN25 315 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 NCF1P14598 390 aaPredicted RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 POU3F2P20265 443 aaPredicted RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 GSTM2P28161 218 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 HNRNPH1P31943 449 aaKnown RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 SSR4P51571 173 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 SLC12A2P55011 1212 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 RAB38P57729 211 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 GPR85P60893 370 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 FRG1Q14331 258 aaKnown RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 TRIM40Q6P9F5 258 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 TMIGD1Q6UXZ0 262 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 CHERPQ8IWX8 916 aaKnown RBP15.06■□□□□ 0
COL18A1-205ENST00000423214 SCUBE1Q8IWY4 988 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 KLHDC8AQ8IYD2 350 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 FAM57AQ8TBR7 257 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 NCLNQ969V3 563 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 PRM3Q9NNZ6 103 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 ADAP2Q9NPF8 381 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 TIMMDC1Q9NPL8 285 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 NSMCE4AQ9NXX6 385 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 WWOXQ9NZC7 414 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 ERVK-11Q9UQG0 969 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 SNX24Q9Y343 169 aa15.06■□□□□ 0
COL18A1-205ENST00000423214 ANKDD1BA6NHY2 528 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 A8MVJ9 347 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 ACOT7O00154 380 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 TUBB4AP04350 444 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 TFEBP19484 476 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 GDF5P43026 501 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 KIR3DL1P43629 444 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 HSD17B7P56937 341 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 TAS2R39P59534 338 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 PDIA2Q13087 525 aaKnown RBP15.05■□□□□ -0
COL18A1-205ENST00000423214 RCN2Q14257 317 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 MEX3BQ6ZN04 569 aaKnown RBP15.05■□□□□ -0
COL18A1-205ENST00000423214 FGD2Q7Z6J4 655 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 ZNF295-AS1Q8N0V1 137 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 FBXO36Q8NEA4 188 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 MS4A6EQ96DS6 147 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 C14orf79Q96F83 325 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 SPOCK3Q9BQ16 436 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 AICDAQ9GZX7 198 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 POPDC3Q9HBV1 291 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 HPF1Q9NWY4 346 aa15.05■□□□□ -0
COL18A1-205ENST00000423214 YARS2Q9Y2Z4 477 aaKnown RBP15.05■□□□□ -0
COL18A1-205ENST00000423214 EFCAB8A8MWE9 144 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ADAM10O14672 748 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 CLGNO14967 610 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 SEC31AO94979 1220 aaKnown RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 IFNA16P05015 189 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 PPP2R1BP30154 601 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 SLC6A12P48065 614 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 PLA2G16P53816 162 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 PLGLB1Q02325 96 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 RUNX2Q13950 521 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 TGFBIQ15582 683 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ELAVL1Q15717 326 aaKnown RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 C18orf21Q32NC0 220 aaPredicted RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 CMPK2Q5EBM0 449 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 TMEM211Q6ICI0 200 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ARHGAP11AQ6P4F7 1023 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 SLCO4C1Q6ZQN7 724 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 CEP128Q6ZU80 1094 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 MDGA2Q7Z553 956 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 CLNKQ7Z7G1 428 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ZNF595Q8IYB9 648 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 TCAIMQ8N3R3 496 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ZFP62Q8NB50 900 aaPredicted RBP15.04■□□□□ -0
COL18A1-205ENST00000423214 PSD4Q8NDX1 1056 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 OR2L5Q8NG80 312 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 C16orf52Q8NHV5 167 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 ASB15Q8WXK1 588 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 RHBDF1Q96CC6 855 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 SEC16BQ96JE7 1060 aa15.04■□□□□ -0
COL18A1-205ENST00000423214 CAPS2Q9BXY5 557 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms