RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PKD1L2Q7Z442 2459 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 IGLV3-12A0A075B6K2 115 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 A0A0A6YYD5 115 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 LOC101059948A0A1B0GTJ6 334 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 TCP11X1B4DZS4 312 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 RGS14O43566 566 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 DNAJB6O75190 326 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 OLR1P78380 273 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 CLN3Q13286 438 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 NCF4Q15080 339 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 SYT16Q17RD7 645 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 SPIN4Q56A73 249 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 MRPL14Q6P1L8 145 aaKnown RBP16.07■□□□□ 0.16
COL7A1-202ENST00000422991 Q6ZSR9 355 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 FAM47EQ6ZV65 393 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 OVCH1Q7RTY7 1134 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 C1orf52Q8N6N3 182 aaKnown RBP16.07■□□□□ 0.16
COL7A1-202ENST00000422991 IL22RA1Q8N6P7 574 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 ZNF248Q8NDW4 579 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 PIWIL2Q8TC59 973 aaKnown RBP16.07■□□□□ 0.16
COL7A1-202ENST00000422991 CHTF18Q8WVB6 975 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 C11orf24Q96F05 449 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-202ENST00000422991 APIPQ96GX9 242 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 C3orf30Q96M34 536 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 NPLQ9BXD5 320 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-202ENST00000422991 SLC26A1Q9H2B4 701 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 TRPC4Q9UBN4 977 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 ADAM29Q9UKF5 820 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 CROTQ9UKG9 612 aa16.07■□□□□ 0.16
COL7A1-202ENST00000422991 C21orf140B9A014 251 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 SLCO1B7G3V0H7 640 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 HDAC3O15379 428 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 CHST10O43529 356 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 CNOT3O75175 753 aaKnown RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ALBP02768 609 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 RAB40ALP0C0E4 278 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 KITP10721 976 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 TCN2P20062 427 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 HK2P52789 917 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ACSM2AQ08AH3 577 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 DNASE1L3Q13609 305 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 RUNX2Q13950 521 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 NR6A1Q15406 480 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 SPDYAQ5MJ70 313 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ACSM2BQ68CK6 577 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 PAGE2Q7Z2X7 111 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 SHISA5Q8N114 240 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 CA13Q8N1Q1 262 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ENDOVQ8N8Q3 282 aaKnown RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 OR51Q1Q8NH59 317 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 KCNE4Q8WWG9 221 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 METTL2AQ96IZ6 378 aaKnown RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 FAM117AQ9C073 453 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 WDR54Q9H977 334 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 LRTM1Q9HBL6 345 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 LYRM4Q9HD34 91 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 MKKSQ9NPJ1 570 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 PFDN4Q9NQP4 134 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 SIRT5Q9NXA8 310 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ZNF282Q9UDV7 671 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 VTI1BQ9UEU0 232 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 GPN3Q9UHW5 284 aaPredicted RBP16.06■□□□□ 0.16
COL7A1-202ENST00000422991 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 ZFHX4Q86UP3 3567 aa16.06■□□□□ 0.16
COL7A1-202ENST00000422991 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 CELSR3Q9NYQ7 3312 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 VSTM2BA6NLU5 285 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 LSM1O15116 133 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 TMPRSS11DO60235 418 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 EDF1O60869 148 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 KLK1P06870 262 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 RNH1P13489 461 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 TPP2P29144 1249 aaPredicted RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 DLSTP36957 453 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 XCR1P46094 333 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 LIM2P55344 173 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 RAE1P78406 368 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 NKG7Q16617 165 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 MLIPQ5VWP3 458 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 MRM1Q6IN84 353 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 GALNT18Q6P9A2 607 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 MAVSQ7Z434 540 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 WDR75Q8IWA0 830 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 ZC3H7AQ8IWR0 971 aaKnown RBP16.05■□□□□ 0.16
COL7A1-202ENST00000422991 NUF2Q9BZD4 464 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 TGIF2Q9GZN2 237 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 MEAF6Q9HAF1 191 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 C14orf105Q9NVL8 296 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 RIC8BQ9NVN3 520 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 C1orf109Q9NX04 203 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 DAPP1Q9UN19 280 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 PCDHGA6Q9Y5G7 932 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 LAMA5O15230 3695 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 CCDC88CQ9P219 2028 aa16.05■□□□□ 0.16
COL7A1-202ENST00000422991 ATP6AP2A0A1C7CYW4 349 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 TRPC5OSA6NMA1 111 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 ZNF195O14628 629 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 PCDH7O60245 1069 aa16.04■□□□□ 0.16
COL7A1-202ENST00000422991 ATP6AP2O75787 350 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms