RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZNF10P21506 573 aaPredicted RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 DRD4P21917 467 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 FBLP22087 321 aaKnown RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 TIA1P31483 386 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX55-203ENST00000421670 TSFMP43897 325 aaKnown RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 ARFIP1P53367 373 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 ABHD18Q0P651 414 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 ARHGAP40Q5TG30 622 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 LCN10Q6JVE6 187 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 PRMT9Q6P2P2 845 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 FAM199XQ6PEV8 388 aaPredicted RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 IGF2-ASQ6U949 168 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 LARP4Q71RC2 724 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX55-203ENST00000421670 PAGE2Q7Z2X7 111 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 TIPARPQ7Z3E1 657 aaKnown RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 PROKR1Q8TCW9 393 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 SERINC2Q96SA4 455 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 SPRY4Q9C004 299 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 DDX31Q9H8H2 851 aaKnown RBP14.87□□□□□ -0.03
DDX55-203ENST00000421670 KCNK13Q9HB14 408 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 ZNF304Q9HCX3 659 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 DLGAP4Q9Y2H0 992 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 PCDHGA7Q9Y5G6 932 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 DMXL2Q8TDJ6 3036 aa14.87□□□□□ -0.03
DDX55-203ENST00000421670 GNG14A0A1W2PPG7 69 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 H0YIG0 161 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 DXOO77932 396 aaKnown RBP14.86□□□□□ -0.03
DDX55-203ENST00000421670 SKP1P63208 163 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 SLAMF1Q13291 335 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 RUNX2Q13950 521 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 DSG2Q14126 1118 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 NKAIN1Q4KMZ8 207 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 CCNYL2Q5T2Q4 361 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 NOXRED1Q6NXP6 359 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 CYP20A1Q6UW02 462 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 COX15Q7KZN9 410 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 MTERF4Q7Z6M4 381 aaKnown RBP14.86□□□□□ -0.03
DDX55-203ENST00000421670 COL26A1Q96A83 441 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 TMEM120AQ9BXJ8 343 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 RBCK1Q9BYM8 510 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 ROGDIQ9GZN7 287 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 NSRP1Q9H0G5 558 aaKnown RBP14.86□□□□□ -0.03
DDX55-203ENST00000421670 SLC22A11Q9NSA0 550 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 CDC14AQ9UNH5 594 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 CHD8Q9HCK8 2581 aa14.86□□□□□ -0.03
DDX55-203ENST00000421670 ARHGAP10A1A4S6 786 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 STMND1H3BQB6 276 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 VPS4BO75351 444 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 ANXA4P09525 319 aaPredicted RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 MAPK12P53778 367 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 HNRNPH2P55795 449 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 DCDP81605 110 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 SHC2P98077 582 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 TMEM198Q66K66 360 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 GALNT18Q6P9A2 607 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 C6orf15Q6UXA7 325 aaPredicted RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 ACAD11Q709F0 780 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CPLX4Q7Z7G2 160 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CA13Q8N1Q1 262 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 ZCCHC7Q8N3Z6 543 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 EFCAB3Q8N7B9 438 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CDC26Q8NHZ8 85 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 ACTRT2Q8TDY3 377 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 MR1Q95460 341 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 MARK4Q96L34 752 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 LRFN5Q96NI6 719 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 MAPKAP1Q9BPZ7 522 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 SIKE1Q9BRV8 207 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 YIPF2Q9BWQ6 316 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 B3GNT4Q9C0J1 378 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 EPN3Q9H201 632 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 TCF7L2Q9NQB0 619 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 THSD1Q9NS62 852 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CTSFQ9UBX1 484 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 MCM8Q9UJA3 840 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 ADAM29Q9UKF5 820 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 E9PBE3 544 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CHST10O43529 356 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 KLHL41O60662 606 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 KLK3P07288 261 aaPredicted RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 ALDOCP09972 364 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 FAM58BPP0C7Q3 252 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 LBPP18428 481 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 SDC1P18827 310 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 TACR1P25103 407 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 LIM2P55344 173 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 FOXL2P58012 376 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 ERVK-8P63133 956 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 NIPAL1Q6NVV3 410 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 FAM47BQ8NA70 645 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 OR51Q1Q8NH59 317 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CLHC1Q8NHS4 586 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 PEX11GQ96HA9 241 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 METTL2AQ96IZ6 378 aaKnown RBP14.85□□□□□ -0.03
DDX55-203ENST00000421670 FCRL1Q96LA6 429 aa14.85□□□□□ -0.03
DDX55-203ENST00000421670 CSF3RQ99062 836 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms