RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 FKBP10Q96AY3 582 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 TUBGCP3Q96CW5 907 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 METTL2AQ96IZ6 378 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 NPLQ9BXD5 320 aaPredicted RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 CCDC86Q9H6F5 360 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 CLK4Q9HAZ1 481 aaKnown RBP16.6■□□□□ 0.25
LINC00271-201ENST00000421378 LRTM1Q9HBL6 345 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 ADAM29Q9UKF5 820 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 USH1CQ9Y6N9 552 aa16.6■□□□□ 0.25
LINC00271-201ENST00000421378 A0A0A6YYD5 115 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 SEC22BO75396 215 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 GBAP04062 536 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 KLK1P06870 262 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 CYP20A1Q6UW02 462 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 OR51Q1Q8NH59 317 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 C11orf24Q96F05 449 aaPredicted RBP16.59■□□□□ 0.25
LINC00271-201ENST00000421378 PPP3R2Q96LZ3 170 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 YIPF2Q9BWQ6 316 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 TMEM121BQ9BXQ6 578 aaPredicted RBP16.59■□□□□ 0.25
LINC00271-201ENST00000421378 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 CTSFQ9UBX1 484 aa16.59■□□□□ 0.25
LINC00271-201ENST00000421378 ZNF282Q9UDV7 671 aaPredicted RBP16.59■□□□□ 0.25
LINC00271-201ENST00000421378 GPN3Q9UHW5 284 aaPredicted RBP16.59■□□□□ 0.25
LINC00271-201ENST00000421378 CHST10O43529 356 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 PEX11AO75192 247 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 ALBP02768 609 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 TCN2P20062 427 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 TPP2P29144 1249 aaPredicted RBP16.58■□□□□ 0.24
LINC00271-201ENST00000421378 XCR1P46094 333 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 RPL38P63173 70 aaKnown RBP16.58■□□□□ 0.24
LINC00271-201ENST00000421378 SLAMF1Q13291 335 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 NCF4Q15080 339 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 TGIF1Q15583 401 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 CCNYL2Q5T2Q4 361 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 VWA5B1Q5TIE3 1220 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 MLIPQ5VWP3 458 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 GALNT18Q6P9A2 607 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 OVCH1Q7RTY7 1134 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 MAVSQ7Z434 540 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 CA13Q8N1Q1 262 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 CT55Q8WUE5 264 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 MKKSQ9NPJ1 570 aaPredicted RBP16.58■□□□□ 0.24
LINC00271-201ENST00000421378 CROTQ9UKG9 612 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 DAPP1Q9UN19 280 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 TMED5Q9Y3A6 229 aa16.58■□□□□ 0.24
LINC00271-201ENST00000421378 GNG14A0A1W2PPG7 69 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 ZNF195O14628 629 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 PCDH7O60245 1069 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 DNAJB6O75190 326 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 VPS4BO75351 444 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 TIA1P31483 386 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 MAPK12P53778 367 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 LIM2P55344 173 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 OCA2Q04671 838 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 RUNX2Q13950 521 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 KIAA0040Q15053 153 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 RFTN2Q52LD8 501 aaPredicted RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 MRPL14Q6P1L8 145 aaKnown RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 FNDC5Q8NAU1 212 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 ZNF248Q8NDW4 579 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 SNIP1Q8TAD8 396 aaKnown RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 PEX11GQ96HA9 241 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 ZNF317Q96PQ6 595 aaPredicted RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 EBPLQ9BY08 206 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 SLC26A1Q9H2B4 701 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 LYRM4Q9HD34 91 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 WDR70Q9NW82 654 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 LYARQ9NX58 379 aaKnown RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 SIRT5Q9NXA8 310 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 GIMAP2Q9UG22 337 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 MCM8Q9UJA3 840 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 POLR3HQ9Y535 204 aaPredicted RBP16.57■□□□□ 0.24
LINC00271-201ENST00000421378 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
LINC00271-201ENST00000421378 IGLV3-12A0A075B6K2 115 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 C21orf140B9A014 251 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 SDHDO14521 159 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 TLX3O43711 291 aaPredicted RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 MYO1DO94832 1006 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 TGDSO95455 350 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 FAM58BPP0C7Q3 252 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 RNH1P13489 461 aaKnown RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 ALOX15P16050 662 aaPredicted RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 EPHA3P29320 983 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 LSP1P33241 339 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 DLSTP36957 453 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 RAE1P78406 368 aaKnown RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 C6orf136Q5SQH8 315 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 MRM1Q6IN84 353 aaKnown RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 SHISA5Q8N114 240 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 EFCAB3Q8N7B9 438 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 STT3BQ8TCJ2 826 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 KCNE4Q8WWG9 221 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 KIAA1143Q96AT1 154 aaPredicted RBP16.56■□□□□ 0.24
LINC00271-201ENST00000421378 TBC1D20Q96BZ9 403 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 CHMP6Q96FZ7 201 aa16.56■□□□□ 0.24
LINC00271-201ENST00000421378 OR1F2PQ96R84 312 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms