RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TSNAXIP1Q2TAA8 658 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 LIPJQ5W064 366 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 FAM219BQ5XKK7 198 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 OR52B6Q8NGF0 335 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 HUS1BQ8NHY5 278 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 ELP5Q8TE02 316 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 HAS2Q92819 552 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 SERINC2Q96SA4 455 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 IPPKQ9H8X2 491 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 MMP25Q9NPA2 562 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 PRDM9Q9NQV7 894 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 PLA2G3Q9NZ20 509 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 DAPP1Q9UN19 280 aa19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 USP9XQ93008 2570 aaPredicted RBP19.34■□□□□ 0.69
PKNOX1-202ENST00000418336 RTCAO00442 366 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 PRMT3O60678 531 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 ETHE1O95571 254 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 ICAM2P13598 275 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 ATP5A1P25705 553 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TSFMP43897 325 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 SLC26A5P58743 744 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TRAF3Q13114 568 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 HIST2H2ACQ16777 129 aaPredicted RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TEX35Q5T0J7 233 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 DEPDC1Q5TB30 811 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 KHDRBS2Q5VWX1 349 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 HIST2H2AA3Q6FI13 130 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TRIM40Q6P9F5 258 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 RPS27LQ71UM5 84 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 UBE2E3Q969T4 207 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 MTBPQ96DY7 904 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 PHF21BQ96EK2 531 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 PTCHD1Q96NR3 888 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 MRPL57Q9BQC6 102 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 RNF32Q9H0A6 362 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 EPS8L2Q9H6S3 715 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 DMRT3Q9NQL9 472 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TMEM216Q9P0N5 145 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 RNF11Q9Y3C5 154 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 MMACHCQ9Y4U1 282 aa19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 TNPO3Q9Y5L0 923 aaKnown RBP19.33■□□□□ 0.68
PKNOX1-202ENST00000418336 A8MT66 165 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 FOXO6A8MYZ6 492 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 PPP6CO00743 305 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 WDPCPO95876 746 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 TGFB1P01137 390 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 SERPINB1P30740 379 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 PIK3CBP42338 1070 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 GPR143P51810 404 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 MTTPP55157 894 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 OR4D2P58180 307 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 BTBD16Q32M84 506 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 IQCKQ8N0W5 287 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 GALNT11Q8NCW6 608 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 DNAJB14Q8TBM8 379 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF483Q8TF39 744 aaPredicted RBP19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 FAR2Q96K12 515 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 KCNC2Q96PR1 638 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 CDK15Q96Q40 435 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 NTMT1Q9BV86 223 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 OR51B5Q9H339 312 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 NOL11Q9H8H0 719 aaKnown RBP19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 SLAMF7Q9NQ25 335 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 ASF1BQ9NVP2 202 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF225Q9UK10 706 aa19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 PPIEQ9UNP9 301 aaKnown RBP19.32■□□□□ 0.68
PKNOX1-202ENST00000418336 SAGE2PA6NJ88 616 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 TCP11X1B4DZS4 312 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 PLPP1O14494 284 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 B3GALT2O43825 422 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF500O60304 480 aaPredicted RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 PCNAP12004 261 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 PPP2R1BP30154 601 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 TNFSF10P50591 281 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF169Q14929 603 aaPredicted RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 EXT1Q16394 746 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 TMEM35AQ53FP2 167 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 IRAK1BP1Q5VVH5 260 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 KIF2BQ8N4N8 673 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 CISD2Q8N5K1 135 aaKnown RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 ACOT4Q8N9L9 421 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 FAM47BQ8NA70 645 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 APCDD1LQ8NCL9 501 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 CMTM7Q96FZ5 175 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 LPAR4Q99677 370 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 MAPKAP1Q9BPZ7 522 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 TBCDQ9BTW9 1192 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 SORBS1Q9BX66 1292 aaKnown RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 ILKAPQ9H0C8 392 aaPredicted RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 LYRM4Q9HD34 91 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 PSD3Q9NYI0 1048 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 PSMC3IPQ9P2W1 217 aaPredicted RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 ZNF223Q9UK11 482 aaPredicted RBP19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 EMCNQ9ULC0 261 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 TMCO1Q9UM00 188 aa19.31■□□□□ 0.68
PKNOX1-202ENST00000418336 A0A1W2PPM1 405 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 SAP18O00422 153 aaKnown RBP19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 SH3BGRLO75368 114 aa19.3■□□□□ 0.68
PKNOX1-202ENST00000418336 HIST1H1TP22492 207 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms