RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ACSS1Q9NUB1 689 aaPredicted RBP15.99■□□□□ 0.15
SSBP3-205ENST00000417664 ACTR10Q9NZ32 417 aa15.99■□□□□ 0.15
SSBP3-205ENST00000417664 URADA6NGE7 173 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 PDPK1O15530 556 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ERI3O43414 337 aaKnown RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 SERPINA1P01009 418 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 CSF2P04141 144 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 FAM58BPP0C7Q3 252 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 UGT2B7P16662 529 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 JUNDP17535 347 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 HIST1H1TP22492 207 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 UQCRC2P22695 453 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 GTF2A1P52655 376 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 BLMHQ13867 455 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ELOCQ15369 112 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ADRM1Q16186 407 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 MRM1Q6IN84 353 aaKnown RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 SPRED1Q7Z699 444 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 PTOV1Q86YD1 416 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 FAM20CQ8IXL6 584 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 NAGSQ8N159 534 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 FRMD1Q8N878 549 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 C11orf65Q8NCR3 313 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 FBXO30Q8TB52 745 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 FAM110BQ8TC76 370 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 SLC37A2Q8TED4 501 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 JPH3Q8WXH2 748 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 CIDECQ96AQ7 238 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 PYURFQ96I23 114 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 SPACA7Q96KW9 195 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ROGDIQ9GZN7 287 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 TBC1D17Q9HA65 648 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 PRDM7Q9NQW5 492 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ZNF639Q9UID6 485 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 NUP214P35658 2090 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 ARHGEF17Q96PE2 2063 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-205ENST00000417664 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
SSBP3-205ENST00000417664 A0A1W2PR77 199 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 OR6C74A6NCV1 312 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 PRKD3O94806 890 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 SLC35G6P0C7Q6 338 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 EFNA1P20827 205 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-205ENST00000417664 KDELR2P33947 212 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 PCGF2P35227 344 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 MLLT1Q03111 559 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-205ENST00000417664 TOR1AIP1Q5JTV8 583 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 SDR16C5Q8N3Y7 309 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 PJA1Q8NG27 643 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 GAL3ST3Q96A11 431 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 NLNQ9BYT8 704 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 AICDAQ9GZX7 198 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 TMEM38AQ9H6F2 299 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 DNAJB9Q9UBS3 223 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 FAF1Q9UNN5 650 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-205ENST00000417664 AP4B1Q9Y6B7 739 aa15.97■□□□□ 0.15
SSBP3-205ENST00000417664 RNF103-CHMP3A0A140T963 221 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 GSAPA4D1B5 854 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 TXNDC9O14530 226 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 VILLO15195 856 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 RASAL1O95294 804 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 NME1P15531 152 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 CKMT2P17540 419 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 POLR2CP19387 275 aaPredicted RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ATP5A1P25705 553 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 MANFP55145 182 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 PCBP4P57723 403 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 SIM2Q14190 667 aaPredicted RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ELOAQ14241 798 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 FIGLAQ6QHK4 219 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 SPESP1Q6UW49 350 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ENPP6Q6UWR7 440 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ZNF793Q6ZN11 406 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 TMEM26Q6ZUK4 368 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ASPGQ86U10 573 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 SLC30A8Q8IWU4 369 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ACOT4Q8N9L9 421 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 PSMA8Q8TAA3 256 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 ZDHHC1Q8WTX9 485 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 TM4SF19Q96DZ7 209 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 SLC29A1Q99808 456 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 LRRC61Q9BV99 259 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 KLHL31Q9H511 634 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 LYARQ9NX58 379 aaKnown RBP15.96■□□□□ 0.15
SSBP3-205ENST00000417664 OAZ3Q9UMX2 235 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 V9GYQ6 96 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 PRUNE2Q8WUY3 3088 aa15.96■□□□□ 0.15
SSBP3-205ENST00000417664 FAM149AA5PLN7 773 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 TLR4O00206 839 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 MAP3K13O43283 966 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 NTRK1P04629 796 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 CHI3L1P36222 383 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-205ENST00000417664 MAGEA8P43361 318 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 ALDH9A1P49189 494 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 MVDP53602 400 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 RPL6Q02878 288 aaKnown RBP15.95■□□□□ 0.14
SSBP3-205ENST00000417664 HHEXQ03014 270 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 NRF1Q16656 503 aa15.95■□□□□ 0.14
SSBP3-205ENST00000417664 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.95■□□□□ 0.14
SSBP3-205ENST00000417664 ZNF542PQ5EBM4 170 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms