RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
SSB-204ENST00000417292 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
SSB-204ENST00000417292 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 CILP2Q8IUL8 1156 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 ZNF740Q8NDX6 193 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 OR2M7Q8NG81 312 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 ASB11Q8WXH4 323 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 C16orf45Q96MC5 204 aaPredicted RBP12.78□□□□□ -0.36
SSB-204ENST00000417292 CNPPD1Q9BV87 410 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 ATG10Q9H0Y0 220 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 TIMMDC1Q9NPL8 285 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 FBXO6Q9NRD1 293 aaPredicted RBP12.78□□□□□ -0.36
SSB-204ENST00000417292 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
SSB-204ENST00000417292 SNX24Q9Y343 169 aa12.78□□□□□ -0.36
SSB-204ENST00000417292 IGKV3D-11A0A0A0MRZ8 115 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 A0A1B0GVC2 190 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 EFCAB8A8MWE9 144 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 G3V3Y1 287 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 H3BMM5 538 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 GFYI3L273 518 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 GLSO94925 669 aaPredicted RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 ESR1P03372 595 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 JAK1P23458 1154 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 PCSK6P29122 969 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 SKIV2L2P42285 1042 aaKnown RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 CLCN7P51798 805 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 TBPL1P62380 186 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 PLGLB1Q02325 96 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 HYAL2Q12891 473 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 CUL1Q13616 776 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 HERC3Q15034 1050 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 DAZAP2Q15038 168 aaPredicted RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 DEFB134Q4QY38 66 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 HSP90AA5PQ58FG0 334 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 QSOX2Q6ZRP7 698 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 SYDE1Q6ZW31 735 aaPredicted RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 DPH5Q9H2P9 285 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 ZNF395Q9H8N7 513 aaPredicted RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
SSB-204ENST00000417292 NECTIN3Q9NQS3 549 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 RNF14Q9UBS8 474 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 FBXW2Q9UKT8 454 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 MPDZO75970 2070 aa12.77□□□□□ -0.37
SSB-204ENST00000417292 NBEAL1Q6ZS30 2694 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 ACOT7O00154 380 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 TP73O15350 636 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 PRKNO60260 465 aaPredicted RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 CELA3AP09093 270 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 SLC35G6P0C7Q6 338 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 PGAM1P18669 254 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 PEX19P40855 299 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 ELK3P41970 407 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 SLC1A2P43004 574 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 MAGEA5P43359 124 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 RPL21P46778 160 aaKnown RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 SSR4P51571 173 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 CLCN2P51788 898 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 MEF2AQ02078 507 aaPredicted RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 CRYMQ14894 314 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 XKR6Q5GH73 641 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 C1orf185Q5T7R7 199 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 RGS9BPQ6ZS82 235 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 SLC22A16Q86VW1 577 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 ANKMY2Q8IV38 441 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 CIARTQ8N365 385 aaPredicted RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 TMEM251Q8N6I4 163 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 MFSD9Q8NBP5 474 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 RELL2Q8NC24 303 aaPredicted RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 LRRN4CLQ8ND94 238 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 B3GNT7Q8NFL0 401 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 CFAP36Q96G28 342 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 SNF8Q96H20 258 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 TCF12Q99081 682 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 SARGQ9BW04 601 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 LIN28AQ9H9Z2 209 aaKnown RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 PLAC1Q9HBJ0 212 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 IARS2Q9NSE4 1012 aaKnown RBP12.76□□□□□ -0.37
SSB-204ENST00000417292 SLC17A6Q9P2U8 582 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 ERVK-11Q9UQG0 969 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 CHMP2BQ9UQN3 213 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 MED16Q9Y2X0 877 aa12.76□□□□□ -0.37
SSB-204ENST00000417292 FAM171A2A8MVW0 826 aa12.75□□□□□ -0.37
SSB-204ENST00000417292 AQP7O14520 342 aa12.75□□□□□ -0.37
SSB-204ENST00000417292 NDUFS4O43181 175 aa12.75□□□□□ -0.37
SSB-204ENST00000417292 RAD51CO43502 376 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms