RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TRMOQ9BU70 441 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 AHSPQ9NZD4 102 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 ZNF225Q9UK10 706 aa21.8■■□□□ 1.08
SMARCB1-205ENST00000417137 FER1L5A0AVI2 2057 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 ARGFXA6NJG6 315 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 ULK1O75385 1050 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 JRKO75564 520 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 ZWINTO95229 277 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 H2AFXP16104 143 aaPredicted RBP21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 SSR2P43308 183 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 ZNF33BQ06732 778 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 RUNX2Q13950 521 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 UBE3DQ7Z6J8 389 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 RNF175Q8N4F7 328 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 AGAP11Q8TF27 550 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 VN1R1Q9GZP7 353 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 ING2Q9H160 280 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 BRF2Q9HAW0 419 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 TMBIM4Q9HC24 238 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 HS3ST3B1Q9Y662 390 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 SPACA6W5XKT8 324 aa21.79■■□□□ 1.08
SMARCB1-205ENST00000417137 SAP18O00422 153 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 MANBAO00462 879 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 DNAJB6O75190 326 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 ALOX12BO75342 701 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 CRCPO75575 148 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 ACPPP15309 386 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 HIST1H1TP22492 207 aaPredicted RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 ATP5A1P25705 553 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 LINC00303Q3SY05 128 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 KIRREL2Q6UWL6 708 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 ACOT4Q8N9L9 421 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 LSM14AQ8ND56 463 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 PLPP5Q8NEB5 264 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 GATA5Q9BWX5 397 aaPredicted RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 LYRM4Q9HD34 91 aa21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 C19orf25Q9UFG5 118 aaPredicted RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 MRPS33Q9Y291 106 aaKnown RBP21.78■■□□□ 1.08
SMARCB1-205ENST00000417137 CLDN4O14493 209 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 SOCS6O14544 535 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 NPHS1O60500 1241 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 SEMA3DO95025 777 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 SCELO95171 688 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 PDYNP01213 254 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 BPGMP07738 259 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 C8orf89P0DMQ9 161 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 SFTPCP11686 197 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 HSD3B1P14060 373 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 HSD3B2P26439 372 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 CERS1P27544 350 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 ETV4P43268 484 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 POLE2P56282 527 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 RAB38P57729 211 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 FAAH2Q6GMR7 532 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 NUDCD3Q8IVD9 361 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 TMEM151BQ8IW70 566 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 CLEC1AQ8NC01 280 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 MECRQ9BV79 373 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 ADNPQ9H2P0 1102 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 EML4Q9HC35 981 aaKnown RBP21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 LANCL2Q9NS86 450 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 DAPP1Q9UN19 280 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 IGSF10Q6WRI0 2623 aa21.77■■□□□ 1.08
SMARCB1-205ENST00000417137 RTCAO00442 366 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 PLPP1O14494 284 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 UBFD1O14562 309 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 PRMT3O60678 531 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 B4GALT2O60909 372 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 CDC123O75794 336 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 SERPINB5P36952 375 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 LIM2P55344 173 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 DCAF10Q5QP82 559 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 TMEM205Q6UW68 189 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 PAGE2Q7Z2X7 111 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 ZCCHC7Q8N3Z6 543 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 GBP7Q8N8V2 638 aaPredicted RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 OR11G2Q8NGC1 345 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 PPP1R14CQ8TAE6 165 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 RBCK1Q9BYM8 510 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 VIPAS39Q9H9C1 493 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 ATP13A2Q9NQ11 1180 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 FARSBQ9NSD9 589 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 MS4A12Q9NXJ0 267 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 FBXL4Q9UKA2 621 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 G3BP2Q9UN86 482 aaKnown RBP21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 SLC12A4Q9UP95 1085 aa21.76■■□□□ 1.07
SMARCB1-205ENST00000417137 EIF4E1BA6NMX2 242 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 BIRC5O15392 142 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 SERPINB4P48594 390 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 CCL11P51671 97 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 CSTF3Q12996 717 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 SLAMF1Q13291 335 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 NSDHLQ15738 373 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 AGBL2Q5U5Z8 902 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 ZNF793Q6ZN11 406 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 NDUFAF7Q7L592 441 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 GOLGA6L1Q8N7Z2 621 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 DDX31Q9H8H2 851 aaKnown RBP21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 TUBD1Q9UJT1 453 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 MMACHCQ9Y4U1 282 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms