RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 FAM57AQ8TBR7 257 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ANKRD49Q8WVL7 239 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 NCLNQ969V3 563 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 SEC16BQ96JE7 1060 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 CAPZA3Q96KX2 299 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 SPOCK3Q9BQ16 436 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 CAPS2Q9BXY5 557 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 RHOJQ9H4E5 214 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 TIMMDC1Q9NPL8 285 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 NSMCE4AQ9NXX6 385 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 MOCS1Q9NZB8 636 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ZNF223Q9UK11 482 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 PPIEQ9UNP9 301 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 NCOA6Q14686 2063 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 ANKDD1BA6NHY2 528 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 NCF1BA6NI72 391 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 NCF1CA8MVU1 366 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 CLEC3AO75596 197 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 SEC31AO94979 1220 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 TUBB4AP04350 444 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 NCF1P14598 390 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 TFEBP19484 476 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 PPP2R1BP30154 601 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 SSR4P51571 173 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 PLA2G16P53816 162 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 GPR85P60893 370 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 FASTKD3Q14CZ7 662 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 TGFBIQ15582 683 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 CMPK2Q5EBM0 449 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 MDGA2Q7Z553 956 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ZNF595Q8IYB9 648 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 FAM47BQ8NA70 645 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ZFP62Q8NB50 900 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 CHTF18Q8WVB6 975 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 C14orf79Q96F83 325 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 TRIM31Q9BZY9 425 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 NT5DC2Q9H857 520 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 POPDC3Q9HBV1 291 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ADAP2Q9NPF8 381 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 WWOXQ9NZC7 414 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 GPRC5BQ9NZH0 403 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 ERVK-11Q9UQG0 969 aa13.45□□□□□ -0.26
PAF1-202ENST00000416728 YARS2Q9Y2Z4 477 aaKnown RBP13.45□□□□□ -0.26
PAF1-202ENST00000416728 SYNDIG1LA6NDD5 238 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 A8MVJ9 347 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 TGFBR3LH3BV60 316 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 ZFAND5O76080 213 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 GPR143P51810 404 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 HNRNPFP52597 415 aaKnown RBP13.44□□□□□ -0.26
PAF1-202ENST00000416728 ILF2Q12905 390 aaKnown RBP13.44□□□□□ -0.26
PAF1-202ENST00000416728 RCN2Q14257 317 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 ELAVL1Q15717 326 aaKnown RBP13.44□□□□□ -0.26
PAF1-202ENST00000416728 TCAIMQ8N3R3 496 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 TMEM52Q8NDY8 209 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 QRFPRQ96P65 431 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 SERINC2Q96SA4 455 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 DERL2Q9GZP9 239 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 ENKD1Q9H0I2 346 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 EHD1Q9H4M9 534 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 CNOT10Q9H9A5 744 aaKnown RBP13.44□□□□□ -0.26
PAF1-202ENST00000416728 COPS7BQ9H9Q2 264 aaPredicted RBP13.44□□□□□ -0.26
PAF1-202ENST00000416728 DNAJC11Q9NVH1 559 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 HPF1Q9NWY4 346 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 KCMF1Q9P0J7 381 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 ITGB1BP2Q9UKP3 347 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 CLDN16Q9Y5I7 305 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 CLCA3PQ9Y6N3 262 aa13.44□□□□□ -0.26
PAF1-202ENST00000416728 OTOGQ6ZRI0 2925 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 E7ESA3 106 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 PRKNO60260 465 aaPredicted RBP13.43□□□□□ -0.26
PAF1-202ENST00000416728 OR2J2O76002 312 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 IFNA16P05015 189 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 CERS1P27544 350 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 MTTPP55157 894 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 LIM2P55344 173 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 POU4F1Q01851 419 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 TGM3Q08188 693 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 BMPR2Q13873 1038 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 ADPRMQ3LIE5 342 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 TMEM211Q6ICI0 200 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 MEX3BQ6ZN04 569 aaKnown RBP13.43□□□□□ -0.26
PAF1-202ENST00000416728 C16orf47Q6ZP98 133 aaPredicted RBP13.43□□□□□ -0.26
PAF1-202ENST00000416728 CAPN12Q6ZSI9 719 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 GPALPP1Q8IXQ4 340 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 ZBED8Q8IZ13 594 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 TMEM132CQ8N3T6 1108 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 PSD4Q8NDX1 1056 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 ASB15Q8WXK1 588 aa13.43□□□□□ -0.26
PAF1-202ENST00000416728 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms