RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 A0A1B0GVT2 93 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 I6L893 689 aaPredicted RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 HS3ST1O14792 307 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 MPPED1O15442 326 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 MAGEB2O15479 319 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 KIF1CO43896 1103 aaKnown RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 TM7SF2O76062 418 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 CALCBP10092 127 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 EGR2P11161 476 aaPredicted RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 TSPAN8P19075 237 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 S1PR1P21453 382 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 DRD5P21918 477 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 PIK3R1P27986 724 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 PTGER1P34995 402 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 ME1P48163 572 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 SLC11A1P49279 550 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 KCNK10P57789 538 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 TIMM10P62072 90 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 GABPAQ06546 454 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 SLC20A2Q08357 652 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 MELKQ14680 651 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 FUT11Q495W5 492 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 AARS2Q5JTZ9 985 aaKnown RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 GCNT6Q5T4J0 391 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 LIPKQ5VXJ0 399 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 BTNL8Q6UX41 500 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 MAP7D3Q8IWC1 876 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 ZNF611Q8N823 705 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 FAM47BQ8NA70 645 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 THAP8Q8NA92 274 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 RELL2Q8NC24 303 aaPredicted RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 TMEM174Q8WUU8 243 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 ESAMQ96AP7 390 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 SGF29Q96ES7 293 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 MTERF1Q99551 399 aaKnown RBP2.41□□□□□ -2.02
MCF2-204ENST00000414978 ZNF416Q9BWM5 594 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 SPG21Q9NZD8 308 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 BAIAP2L1Q9UHR4 511 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 TMED7Q9Y3B3 224 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 RIPK3Q9Y572 518 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 PRUNE2Q8WUY3 3088 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 ADGRA3Q8IWK6 1321 aa2.41□□□□□ -2.02
MCF2-204ENST00000414978 A0A0U1RQS6 177 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 TMEM272A0A1B0GTI8 110 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 WDR27A2RRH5 827 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 C2CD4BA6NLJ0 364 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CLDN4O14493 209 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 RASGRF2O14827 1237 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 LDB2O43679 373 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 NDUFS7O75251 213 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 RPS6KA5O75582 802 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 KRT5P13647 590 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 TCEA1P23193 301 aaKnown RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 PKLRP30613 574 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CORO1AP31146 461 aaKnown RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 RPL3P39023 403 aaKnown RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 ENTPD1P49961 510 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 RIPPLY3P57055 190 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CSNK2A1P68400 391 aaPredicted RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 TNFRSF17Q02223 184 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 TCP10Q12799 353 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 PDZK1IP1Q13113 114 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 SNX1Q13596 522 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 PDE7AQ13946 482 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 HNRNPDQ14103 355 aaKnown RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 DPYSQ14117 519 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 ZNF284Q2VY69 593 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 MIDNQ504T8 468 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 HSP90B2PQ58FF3 399 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 DEF8Q6ZN54 512 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 IRF2BP2Q7Z5L9 587 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.4□□□□□ -2.02
MCF2-204ENST00000414978 ADCK1Q86TW2 530 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 MMD2Q8IY49 270 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CSNK2A3Q8NEV1 391 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 WASF1Q92558 559 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 SLAMF9Q96A28 289 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 FRG2BQ96QU4 278 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 POLE3Q9NRF9 147 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CHMP5Q9NZZ3 219 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 CFAP45Q9UL16 551 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 GRIP1Q9Y3R0 1128 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 NFE2L3Q9Y4A8 694 aa2.4□□□□□ -2.02
MCF2-204ENST00000414978 ARPC4-TTLL3A0A0A6YYG9 625 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 A0A0U1RQJ8 604 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CCDC162PA2VCL2 907 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 ARHGAP42A6NI28 874 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 SRRM3A6NNA2 597 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 CCDC169A6NNP5 214 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 GABRR3A8MPY1 467 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PATE3B3GLJ2 98 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 PES1O00541 588 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 EBAG9O00559 213 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 MATN3O15232 486 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 FRAT2O75474 233 aaPredicted RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 AREGP15514 252 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 UBA1P22314 1058 aaKnown RBP2.4□□□□□ -2.03
MCF2-204ENST00000414978 EPHA2P29317 976 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 CCND2P30279 289 aa2.4□□□□□ -2.03
MCF2-204ENST00000414978 GNL1P36915 607 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms