RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZFR2Q9UPR6 939 aaKnown RBP16.35■□□□□ 0.21
PTPRC-206ENST00000413409 TMEM98Q9Y2Y6 226 aa16.35■□□□□ 0.21
PTPRC-206ENST00000413409 FAM220BPB1ANY3 271 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 DENRO43583 198 aaKnown RBP16.34■□□□□ 0.21
PTPRC-206ENST00000413409 C1GALT1C1LP0DN25 315 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 ALPPL2P10696 532 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 MYCLP1P12525 358 aaPredicted RBP16.34■□□□□ 0.21
PTPRC-206ENST00000413409 GGT1P19440 569 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 TACR1P25103 407 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 POLE2P56282 527 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 OR4D2P58180 307 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 PRAMEF13Q5VWM6 474 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 METRNLQ641Q3 311 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 HMBOX1Q6NT76 420 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 NXPE4Q6UWF7 544 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 IFNEQ86WN2 208 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 TRIM69Q86WT6 500 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 TMEM132CQ8N3T6 1108 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 MARVELD2Q8N4S9 558 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 TRPV3Q8NET8 790 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 OR13H1Q8NG92 308 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 ASB12Q8WXK4 309 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 NSMCE2Q96MF7 247 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 HAUS8Q9BT25 410 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 TRIM8Q9BZR9 551 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 PREBQ9HCU5 417 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 SERHLQ9NQF3 203 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 FAM120CQ9NX05 1096 aaKnown RBP16.34■□□□□ 0.21
PTPRC-206ENST00000413409 SCOCQ9UIL1 159 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 ACSL5Q9ULC5 683 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 SRPK3Q9UPE1 567 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 ASF1AQ9Y294 204 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 PCDHGA4Q9Y5G9 962 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 PCYT1BQ9Y5K3 369 aaPredicted RBP16.34■□□□□ 0.21
PTPRC-206ENST00000413409 CACNA1DQ01668 2161 aa16.34■□□□□ 0.21
PTPRC-206ENST00000413409 KCNJ13O60928 360 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 ANXA6P08133 673 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 NPPBP16860 134 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 NUDT1P36639 197 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 KIR3DL1P43629 444 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 TRPC1P48995 793 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 PHEXP78562 749 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 FGL2Q14314 439 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 SLBPQ14493 270 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTPRC-206ENST00000413409 HIST2H2ACQ16777 129 aaPredicted RBP16.33■□□□□ 0.2
PTPRC-206ENST00000413409 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 HIST2H2AA3Q6FI13 130 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 GALNT18Q6P9A2 607 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 CAMKMTQ7Z624 323 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 GPR180Q86V85 440 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 TBC1D21Q8IYX1 336 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 SLC22A18ASQ8N1D0 253 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
PTPRC-206ENST00000413409 OR2T12Q8NG77 320 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 OR5K2Q8NHB8 316 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 HUS1BQ8NHY5 278 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 EME1Q96AY2 570 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 CXorf40BQ96DE9 158 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 ZNF583Q96ND8 569 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 PELI2Q9HAT8 420 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 DMRT3Q9NQL9 472 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 MBNL1Q9NR56 388 aaKnown RBP16.33■□□□□ 0.2
PTPRC-206ENST00000413409 AGPAT4Q9NRZ5 378 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 SLC25A37Q9NYZ2 338 aa16.33■□□□□ 0.2
PTPRC-206ENST00000413409 CELSR2Q9HCU4 2923 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CCDC187A0A096LP49 1063 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PIPSLA2A3N6 862 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 SLC31A1O15431 190 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 AKAP10O43572 662 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 TIPRLO75663 272 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 SMNDC1O75940 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 SLC35G4P0C7Q5 338 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 MTHFD1P11586 935 aaKnown RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PCNAP12004 261 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CDH1P12830 882 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 ZNF26P17031 533 aaPredicted RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 HOXB6P17509 224 aaKnown RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 FASP25445 335 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PTPN6P29350 595 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 TIA1P31483 386 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 HPCAL1P37235 193 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PIK3CBP42338 1070 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PHC1P78364 1004 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 FOLH1Q04609 750 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 DDX39BQ13838 428 aaKnown RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CYP2A13Q16696 494 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CYP51A1Q16850 503 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 INTS11Q5TA45 600 aaKnown RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 VASH2Q86V25 355 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 HORMAD1Q86X24 394 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CALHM3Q86XJ0 350 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 DTWD1Q8N5C7 304 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 OR8J2Q8NGG1 315 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 NUDT8Q8WV74 236 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 CHTF18Q8WVB6 975 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 TFGQ92734 400 aaPredicted RBP16.32■□□□□ 0.2
PTPRC-206ENST00000413409 KLK6Q92876 244 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 ZNF597Q96LX8 424 aa16.32■□□□□ 0.2
PTPRC-206ENST00000413409 MTERF1Q99551 399 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms