RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.74□□□□□ -0.05
MCF2L-211ENST00000413354 CPSF2Q9P2I0 782 aaKnown RBP14.74□□□□□ -0.05
MCF2L-211ENST00000413354 ZNF490Q9ULM2 529 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-211ENST00000413354 NFU1Q9UMS0 254 aa14.74□□□□□ -0.05
MCF2L-211ENST00000413354 IGKV3D-11A0A0A0MRZ8 115 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 A0A0G2JN53 185 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 EXOC1LA0A1B0GW35 172 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 TCRBV16S1A1N1A0A5B0 115 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 OR5H15A6NDH6 313 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 SAGE2PA6NJ88 616 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 A8MUI8 341 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 CDK2AP1O14519 115 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 KLK8O60259 260 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 UGDHO60701 494 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 DNAJB6O75190 326 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 WDPCPO95876 746 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 PCNAP12004 261 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 COL6A2P12110 1019 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 PHEXP78562 749 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 PCBP2Q15366 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
MCF2L-211ENST00000413354 NR6A1Q15406 480 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 MEP1AQ16819 746 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 LGSNQ5TDP6 509 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 LIPJQ5W064 366 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 H3F3CQ6NXT2 135 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 CHSY3Q70JA7 882 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 TRMT10CQ7L0Y3 403 aaKnown RBP14.73□□□□□ -0.05
MCF2L-211ENST00000413354 CYP4X1Q8N118 509 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 LGI4Q8N135 537 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 ZNF473Q8WTR7 871 aaKnown RBP14.73□□□□□ -0.05
MCF2L-211ENST00000413354 REPS1Q96D71 796 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 GPR78Q96P69 363 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 TBCDQ9BTW9 1192 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 MS4A8Q9BY19 250 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 PRTFDC1Q9NRG1 225 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 PLA2G3Q9NZ20 509 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 STMN3Q9NZ72 180 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 SPACA6W5XKT8 324 aa14.73□□□□□ -0.05
MCF2L-211ENST00000413354 SPTBN1Q01082 2364 aaKnown RBP14.72□□□□□ -0.05
MCF2L-211ENST00000413354 TBX6O95947 436 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-211ENST00000413354 SNRPAP09012 282 aaKnown RBP14.72□□□□□ -0.05
MCF2L-211ENST00000413354 MAOAP21397 527 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 CERS1P27544 350 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 HSD17B7P56937 341 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 BTG2P78543 158 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 RUNX2Q13950 521 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 TERF2Q15554 542 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 ACER2Q5QJU3 275 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 ADNP2Q6IQ32 1131 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 MYLK4Q86YV6 388 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-211ENST00000413354 SCUBE1Q8IWY4 988 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 ZNF595Q8IYB9 648 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 BCORP1Q8N888 145 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 ST6GALNAC3Q8NDV1 305 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 CATSPER1Q8NEC5 780 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 OR7G3Q8NG95 312 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 GRHL3Q8TE85 626 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 DCAKDQ8WVC6 231 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 CMTM7Q96FZ5 175 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 SCYL1Q96KG9 808 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 ACTR8Q9H981 624 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 LYRM4Q9HD34 91 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 DAPP1Q9UN19 280 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 NTNG1Q9Y2I2 539 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 TSC22D4Q9Y3Q8 395 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 PCDHGA11Q9Y5H2 935 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 POLEQ07864 2286 aa14.72□□□□□ -0.05
MCF2L-211ENST00000413354 BLACEA4D250 179 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 ANKUB1A6NFN9 424 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 TRIM49D1C9J1S8 452 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 FAM227AF5H4B4 570 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 SMIM24O75264 130 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 AGFG2O95081 481 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 RHOXF2BP0C7M4 288 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 PIK3CBP42338 1070 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 LIM2P55344 173 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 SLC13A2Q13183 592 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 MRPL49Q13405 166 aaKnown RBP14.71□□□□□ -0.05
MCF2L-211ENST00000413354 GTF2H2Q13888 395 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 AP5B1Q2VPB7 878 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 GTF2H2CQ6P1K8 395 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 CRLF3Q8IUI8 442 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 FAM47BQ8NA70 645 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 C7orf57Q8NEG2 295 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 UHMK1Q8TAS1 419 aaKnown RBP14.71□□□□□ -0.05
MCF2L-211ENST00000413354 ELP5Q8TE02 316 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 FAR1Q8WVX9 515 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 MTBPQ96DY7 904 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 F2RL3Q96RI0 385 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 RHOXF2Q9BQY4 288 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 UTP23Q9BRU9 249 aaKnown RBP14.71□□□□□ -0.05
MCF2L-211ENST00000413354 NECTIN3Q9NQS3 549 aa14.71□□□□□ -0.05
MCF2L-211ENST00000413354 USP9XQ93008 2570 aaPredicted RBP14.71□□□□□ -0.06
MCF2L-211ENST00000413354 STX16-NPEPL1H3BU86 382 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 STX16O14662 325 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 PRAMEF2O60811 474 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 CBX6O95503 412 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 EDN3P14138 238 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 SSR2P43308 183 aa14.7□□□□□ -0.06
MCF2L-211ENST00000413354 RAP1GDS1P52306 607 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms