RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ALG11Q2TAA5 492 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NOXRED1Q6NXP6 359 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 IYDQ6PHW0 289 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 OR2L8Q8NGY9 312 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SLC35G5Q96KT7 338 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NTMT1Q9BV86 223 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CNPPD1Q9BV87 410 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 REEP1Q9H902 201 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 A0A1B0GVT2 93 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SUV39H1O43463 412 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 RNH1P13489 461 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 IGFALSP35858 605 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 KHKP50053 298 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CCR4P51679 360 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ALDH6A1Q02252 535 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 KHDC1Q4VXA5 237 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 METRNLQ641Q3 311 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 TUBA3EQ6PEY2 450 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CLEC14AQ86T13 490 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 HPS6Q86YV9 775 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ENDOVQ8N8Q3 282 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ATG16L2Q8NAA4 619 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 MINDY2Q8NBR6 621 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 PLA2G15Q8NCC3 412 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 FBXO15Q8NCQ5 510 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 OR52B6Q8NGF0 335 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF480Q8WV37 535 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 OR1E3Q8WZA6 343 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 AKAP1Q92667 903 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 DGAT2Q96PD7 388 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 EBF2Q9HAK2 575 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 FGF22Q9HCT0 170 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ZCCHC3Q9NUD5 404 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM45AQ9NWC5 275 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 DLGAP4Q9Y2H0 992 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 WDR81Q562E7 1941 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 PRSS51A0A1B0GVH4 220 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ELOVL7A1L3X0 281 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 GTPBP1O00178 669 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 AP3D1O14617 1153 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 TSPAN4O14817 238 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 COQ9O75208 318 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SCELO95171 688 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 PDYNP01213 254 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NCK1P16333 377 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 RPS6KA3P51812 740 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 LARS2Q15031 903 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM198Q66K66 360 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NAIF1Q69YI7 327 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 IQCHQ86VS3 1027 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SLC9A6Q92581 669 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 KIAA1143Q96AT1 154 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 LRRC3BQ96PB8 259 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 MEAF6Q9HAF1 191 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 BRF2Q9HAW0 419 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 LRIT1Q9P2V4 623 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 PTBP2Q9UKA9 531 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 NEU3Q9UQ49 428 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SH3GLB1Q9Y371 365 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SHROOM3Q8TF72 1996 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 K7EQS6 105 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SDHDO14521 159 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 CLCN2P51788 898 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 EEFSECP57772 596 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PYCR3Q53H96 274 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 UBAP2Q5T6F2 1119 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 DUS1LQ6P1R4 473 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 KIAA0907Q7Z7F0 614 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 C8orf59Q8N0T1 100 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 HUS1BQ8NHY5 278 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 FBXO30Q8TB52 745 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ASB9Q96DX5 294 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 EQTNQ9NQ60 294 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 MLXQ9UH92 298 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 UTS2RQ9UKP6 389 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 HSMCR30P0CW71 290 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 DRD2P14416 443 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PRDX1Q06830 199 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 DCTN2Q13561 401 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PWP1Q13610 501 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 MLIPQ5VWP3 458 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 IKBIPQ70UQ0 350 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 NRROSQ86YC3 692 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PRSS58Q8IYP2 241 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 JPH3Q8WXH2 748 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ATOH1Q92858 354 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ZUFSPQ96AP4 578 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 AIFM2Q9BRQ8 373 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 TTYH1Q9H313 450 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 GSTO2Q9H4Y5 243 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 POLR1BQ9H9Y6 1135 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ZBTB26Q9HCK0 441 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms