RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FAM109BQ6ICB4 259 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PODNL1Q6PEZ8 512 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CXCL17Q6UXB2 119 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 IL34Q6ZMJ4 242 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 GDPGP1Q6ZNW5 385 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 DET1Q7L5Y6 550 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF550Q7Z398 422 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANKS1BQ7Z6G8 1248 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 NUDT13Q86X67 352 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZFAND4Q86XD8 727 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANGPTL5Q86XS5 388 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ECHDC2Q86YB7 292 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 APOBEC3FQ8IUX4 373 aaKnown RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRR15Q8IV56 129 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIAH3Q8IW03 269 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 DHX40Q8IX18 779 aaKnown RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 RHOT1Q8IXI2 618 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PPFIBP2Q8ND30 876 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF555Q8NEP9 628 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR2AK2Q8NG84 335 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR4C3Q8NH37 302 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR4K13Q8NH42 304 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TANKQ92844 425 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 EMG1Q92979 244 aaKnown RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 S100PBPQ96BU1 408 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TM4SF19Q96DZ7 209 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MFSD3Q96ES6 412 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMEM19Q96HH6 336 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZBED3Q96IU2 234 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 GPR137Q96N19 417 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 RAB3IPQ96QF0 476 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIN3AQ96ST3 1273 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 LGMNQ99538 433 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 C19orf43Q9BQ61 176 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 FUCA2Q9BTY2 467 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCDC28BQ9BUN5 200 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PARD6GQ9BYG4 376 aaPredicted RBP-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC28A3Q9HAS3 691 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ST7Q9NRC1 585 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ASF1BQ9NVP2 202 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 OSER1Q9NX31 292 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 RPS6KA6Q9UK32 745 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 FBXL2Q9UKC9 423 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 APPL1Q9UKG1 709 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 ACAD8Q9UKU7 415 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 DDX19BQ9UMR2 479 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAB21L2Q9Y586 359 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 PLXND1Q9Y4D7 1925 aa-1.82□□□□□ -2.7
RNU4-88P-201ENST00000411220 E9PCH4 1651 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GREB1Q4ZG55 1949 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 UNC13BO14795 1591 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV4-30-2A0A087WSY4 118 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A087WWL8 130 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRBV6-5A0A0K0K1A5 114 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LINC00854A0A1B0GVQ3 168 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 A8MUA0 341 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 STMND1H3BQB6 276 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 TTI1O43156 1089 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 SS18L1O75177 396 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ERAL1O75616 437 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE7O76087 117 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ENDOD1O94919 500 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 F10P00742 488 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV4-39P01824 125 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 MT-ND1P03886 318 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGHV4-34P06331 123 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE12FP0CL80 117 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE12GP0CL81 117 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE12IP0CL82 117 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 RARGP13631 454 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PSMB1P20618 241 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 MMP8P22894 467 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 OTX1P32242 354 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC16A2P36021 539 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 TCF7P36402 384 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 NEK4P51957 841 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 FOXL2P58012 376 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 UFM1P61960 85 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 WDR5P61964 334 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAPQ12884 760 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE1Q13065 139 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE4Q13068 117 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 PLA2G7Q13093 441 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 KLF5Q13887 457 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 OASLQ15646 514 aaKnown RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 KYAT1Q16773 422 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CA9Q16790 459 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 MS4A18Q3C1V0 323 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC24Q50LG9 513 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC73Q5JTD7 316 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC8EQ6NSJ5 796 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ANKRD54Q6NXT1 300 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 NFRKBQ6P4R8 1299 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 METAP1DQ6UB28 335 aaPredicted RBP-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CHMP1BQ7LBR1 199 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNX20Q7Z614 316 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 CATSPER3Q86XQ3 398 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF130Q86XS8 419 aa-1.83□□□□□ -2.7
RNU4-88P-201ENST00000411220 ABRAQ8N0Z2 381 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms