RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 INSM2Q96T92 566 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 APOL4Q9BPW4 351 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 TIMMDC1Q9NPL8 285 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 PLSCR2Q9NRY7 297 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 THSD1Q9NS62 852 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 ERVK-11Q9UQG0 969 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 PRKAB1Q9Y478 270 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 OR1A2Q9Y585 309 aa12.96□□□□□ -0.33
LIMS1-205ENST00000410093 PCYT1BQ9Y5K3 369 aaPredicted RBP12.96□□□□□ -0.33
LIMS1-205ENST00000410093 MYO10Q9HD67 2058 aa12.96□□□□□ -0.34
LIMS1-205ENST00000410093 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
LIMS1-205ENST00000410093 STK25O00506 426 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 PLPP1O14494 284 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 TNFRSF10CO14798 259 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 NDUFS4O43181 175 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 PDE9AO76083 593 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
LIMS1-205ENST00000410093 APBB3O95704 486 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 CPNE6O95741 557 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 C6orf47O95873 294 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 IL3P08700 152 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 ACP5P13686 325 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 HOXB2P14652 356 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 GLULP15104 373 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 CTHP32929 405 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 WASP42768 502 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
LIMS1-205ENST00000410093 MVDP53602 400 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 TGM3Q08188 693 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 KCNAB2Q13303 367 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 GAB1Q13480 694 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 HTR4Q13639 388 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SCARB2Q14108 478 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 FGL2Q14314 439 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 FBXO43Q4G163 708 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 IFI44LQ53G44 452 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 ZNF385BQ569K4 471 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 TMEM196Q5HYL7 178 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
LIMS1-205ENST00000410093 KDM4DQ6B0I6 523 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 ANKRD26P1Q6NSI1 321 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 NAGSQ8N159 534 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 PSMA8Q8TAA3 256 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 FBLIM1Q8WUP2 373 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SLC22A18Q96BI1 424 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 MBOAT4Q96T53 435 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SPNS1Q9H2V7 528 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 DUSP12Q9UNI6 340 aa12.95□□□□□ -0.34
LIMS1-205ENST00000410093 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 M0QX08 132 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 PDPK1O15530 556 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ABCB7O75027 752 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 KLHL18O94889 574 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 B3GALT4O96024 378 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ARAFP10398 606 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 HTR1BP28222 390 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 SHMT2P34897 504 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 IGFALSP35858 605 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 PLA2G5P39877 138 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 CSNK1G2P78368 415 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 KCNJ10P78508 379 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 CDK6Q00534 326 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 MEF2AQ02078 507 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 GRSF1Q12849 480 aaKnown RBP eCLIP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 SF1Q15637 639 aaKnown RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 EOGTQ5NDL2 527 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 C6orf141Q5SZD1 244 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TSPYL5Q86VY4 417 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ARMC8Q8IUR7 673 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 OFCC1Q8IZS5 231 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ZNF740Q8NDX6 193 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 OR2A1Q8NGT9 310 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ZFPM2Q8WW38 1151 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TM4SF18Q96CE8 201 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 NEURL3Q96EH8 262 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 C7orf34Q96L11 122 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 OR2M4Q96R27 311 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 NPLQ9BXD5 320 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 ZNF717Q9BY31 904 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 OSGEPL1Q9H4B0 414 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms