RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PLCL2Q9UPR0 1127 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 AP4B1Q9Y6B7 739 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 PCSK5Q92824 1860 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ZMYM6O95789 1325 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 KAT6AQ92794 2004 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 HELTA6NFD8 242 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 ZNF208O43345 1280 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 ECE2O60344 883 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 UFL1O94874 794 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SLITRK3O94933 977 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 MBD3O95983 291 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 IGHEP01854 428 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 MT-ND1P03886 318 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 KRT19P08727 400 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 HIST1H2AGP0C0S8 130 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 ODC1P11926 461 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 CKMT2P17540 419 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TRIM23P36406 574 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 CEBPDP49716 269 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 ENTPD1P49961 510 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 PRMT2P55345 433 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 CLDN17P56750 224 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 RPL23AP62750 156 aaKnown RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 PITX1P78337 314 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 NUCB2P80303 420 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 ZNF91Q05481 1191 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 GABPAQ06546 454 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 DMTNQ08495 405 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TRAP1Q12931 704 aaKnown RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 BTG3Q14201 252 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 HNF4GQ14541 408 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TMEM132DQ14C87 1099 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SPHARQ15513 63 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TRIP10Q15642 601 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 DPYSL2Q16555 572 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TMEM119Q4V9L6 283 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 WASHC2DQ5SRD0 308 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 ARMC12Q5T9G4 340 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TTC23Q5W5X9 447 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SEL1L3Q68CR1 1132 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 FCRLBQ6BAA4 426 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SLC39A4Q6P5W5 647 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 CYP4V2Q6ZWL3 525 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 FAM228AQ86W67 206 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 PSTKQ8IV42 348 aaKnown RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 CRYBG2Q8N1P7 616 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 RDM1Q8NG50 284 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 INPP5DQ92835 1189 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 HIST1H2ACQ93077 130 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 VOPP1Q96AW1 172 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 TMEM45BQ96B21 275 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 OXNAD1Q96HP4 312 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 TXNDC15Q96J42 360 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 FCRL4Q96PJ5 515 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 UBAC1Q9BSL1 405 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 APMAPQ9HDC9 416 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 RPRD1BQ9NQG5 326 aaKnown RBP4.5□□□□□ -1.69
LSM5-205ENST00000409952 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 NIP7Q9Y221 180 aaKnown RBP eCLIP4.5□□□□□ -1.69
LSM5-205ENST00000409952 OR10H1Q9Y4A9 318 aa4.5□□□□□ -1.69
LSM5-205ENST00000409952 MROH5Q6ZUA9 1318 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 A0A075B6Q4 140 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 C4orf47A7E2U8 309 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 CCL24O00175 119 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 TULP2O00295 520 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 DNALI1O14645 258 aaPredicted RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 ARPC1BO15143 372 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 CNOT3O75175 753 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 RBMXL2O75526 392 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE7O76087 117 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 AGTP01019 485 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 APOHP02749 345 aaPredicted RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 CSF2P04141 144 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 FAM106CPP0CH98 169 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE12FP0CL80 117 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE12GP0CL81 117 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE12IP0CL82 117 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GP9P14770 177 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GM2AP17900 193 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 LMO1P25800 156 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 CAPGP40121 348 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 PPT1P50897 306 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 SEC61A1P61619 476 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 TFF2Q03403 129 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE1Q13065 139 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 GAGE4Q13068 117 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 MFAP5Q13361 173 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 SELPLGQ14242 412 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 ZNF234Q14588 700 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 ARHGAP19Q14CB8 494 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 HEPACAMQ14CZ8 416 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 HADHQ16836 314 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 EXOC3L2Q2M3D2 409 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 ITPRIPL2Q3MIP1 535 aa4.49□□□□□ -1.69
LSM5-205ENST00000409952 TDRD12Q587J7 1177 aaKnown RBP4.49□□□□□ -1.69
LSM5-205ENST00000409952 BLOC1S2Q6QNY1 142 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms