RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 TIFAQ96CG3 184 aa14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 CXorf40BQ96DE9 158 aa14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 FAM129BQ96TA1 746 aa14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 TP63Q9H3D4 680 aaPredicted RBP14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 ACER3Q9NUN7 267 aa14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 CAB39Q9Y376 341 aaPredicted RBP14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 CFAP20Q9Y6A4 193 aaKnown RBP14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 KCNE2Q9Y6J6 123 aa14.52□□□□□ -0.08
LYSMD4-204ENST00000409796 NEDD8-MDP1E9PL57 170 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 DNTTP04053 509 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 HOXD10P28358 340 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 S100A5P33763 92 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 CDK6Q00534 326 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 RBBP4Q09028 425 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 C2orf80Q0P641 193 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 LRRC74AQ0VAA2 488 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 GANABQ14697 944 aaKnown RBP14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 PRSS53Q2L4Q9 553 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 BRAT1Q6PJG6 821 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 RNF130Q86XS8 419 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 CLIP3Q96DZ5 547 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 ZNF556Q9HAH1 456 aa14.52□□□□□ -0.09
LYSMD4-204ENST00000409796 WASH3PC4AMC7 463 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ATG13O75143 517 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 GUCY1B2O75343 617 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 LEFTY1O75610 366 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 TGFB1P01137 390 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 FURINP09958 794 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 TIMP2P16035 220 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ITGA2P17301 1181 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 XCR1P46094 333 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ZNF45Q02386 682 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PRKCDQ05655 676 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 EIF4HQ15056 248 aaKnown RBP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PTGES3Q15185 160 aaKnown RBP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 LRIT3Q3SXY7 679 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 FAM209AQ5JX71 171 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 NLRP8Q86W28 1048 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 LILRB4Q8NHJ6 448 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PXYLP1Q8TE99 480 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ZNF486Q96H40 463 aaPredicted RBP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 CRELD1Q96HD1 420 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 OR5M11Q96RB7 305 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 FAM83CQ9BQN1 747 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ROGDIQ9GZN7 287 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 OR51B5Q9H339 312 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 TMEM38AQ9H6F2 299 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 SPG21Q9NZD8 308 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 RGS13O14921 159 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 GPR37L1O60883 481 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 KLHL18O94889 574 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ALOX12P18054 663 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 RECQLP46063 649 aaPredicted RBP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 LIMS1P48059 325 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 UGT2B15P54855 530 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 TBPL1P62380 186 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 E2F2Q14209 437 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 SLBPQ14493 270 aaKnown RBP eCLIP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 SLC5A12Q1EHB4 618 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ARSIQ5FYB1 569 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 HEATR4Q86WZ0 1026 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 C16orf78Q8WTQ4 265 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ZNF480Q8WV37 535 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 GEMIN6Q8WXD5 167 aaKnown RBP14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PPCDCQ96CD2 204 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 TXNDC15Q96J42 360 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PIP5K1AQ99755 562 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 ZSCAN5AQ9BUG6 496 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 RHCGQ9UBD6 479 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 PLXND1Q9Y4D7 1925 aa14.51□□□□□ -0.09
LYSMD4-204ENST00000409796 A8MVJ9 347 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 SNPHO15079 494 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 CCNB2O95067 398 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 CBLP22681 906 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 CHI3L1P36222 383 aaPredicted RBP14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 PRLHRP49683 370 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 DOC2BQ14184 412 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 ELOAQ14241 798 aaKnown RBP14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 ZNF284Q2VY69 593 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 POM121L1PQ3SYA9 428 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 TMEM220Q6QAJ8 160 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 AKAP14Q86UN6 197 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 METTL4Q8N3J2 472 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 OXR1Q8N573 874 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 GLYATL1Q969I3 302 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 MTG2Q9H4K7 406 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 HCN4Q9Y3Q4 1203 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 QSOX1O00391 747 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 TGM5O43548 720 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 GADD45GO95257 159 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 DGKEP52429 567 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 MEF2AQ02078 507 aaPredicted RBP14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 TMEM115Q12893 351 aaPredicted RBP14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 PDE7AQ13946 482 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 TSTQ16762 297 aaKnown RBP14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 CRB2Q5IJ48 1285 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 DESI1Q6ICB0 168 aa14.5□□□□□ -0.09
LYSMD4-204ENST00000409796 TRIM40Q6P9F5 258 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms