RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RTCAO00442 366 aaKnown RBP29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PPP6CO00743 305 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 OTCP00480 354 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CCT5P48643 541 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PRKAA2P54646 552 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 RPS13P62277 151 aaKnown RBP29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 DEPDC1Q5TB30 811 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 QSOX2Q6ZRP7 698 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CPEB2Q7Z5Q1 589 aaKnown RBP29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TBCDQ9BTW9 1192 aa29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 HEMK1Q9Y5R4 338 aaPredicted RBP29.32■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SAP18O00422 153 aaKnown RBP29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 COPEO14579 308 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PLIN3O60664 434 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SUPT7LO94864 414 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TUBBP07437 444 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 RAB38P57729 211 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CLCQ05315 142 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 NSDHLQ15738 373 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CCDC153Q494R4 210 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 LETMD1Q6P1Q0 360 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ZYG11AQ6WRX3 759 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MILR1Q7Z6M3 343 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TRABD2AQ86V40 505 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PPP4R1Q8TF05 950 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 L3HYPDHQ96EM0 354 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 THOC3Q96J01 351 aaKnown RBP29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ROGDIQ9GZN7 287 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 LHPPQ9H008 270 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 GRID1Q9ULK0 1009 aa29.31■■■□□ 2.28
TRAF3IP1-203ENST00000409739 G3V2L1 256 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 KLHL41O60662 606 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SEC24DO94855 1032 aaPredicted RBP29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SCELO95171 688 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 IMPDH1P20839 514 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ATP5A1P25705 553 aaKnown RBP29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 NEK2P51955 445 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 LIM2P55344 173 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 BTG2P78543 158 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 KLRB1Q12918 225 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ADAMTS18Q8TE60 1221 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TRPC4APQ8TEL6 797 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 IMMP1LQ96LU5 166 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 WDR77Q9BQA1 342 aaPredicted RBP29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TUBB6Q9BUF5 446 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 C12orf65Q9H3J6 166 aaKnown RBP29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ZNF225Q9UK10 706 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 DAPP1Q9UN19 280 aa29.3■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SUV39H1O43463 412 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PRMT3O60678 531 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ALPPP05187 535 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CELA2AP08217 269 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MYL2P10916 166 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SSR2P43308 183 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 RAP1GDS1P52306 607 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 IRAK1BP1Q5VVH5 260 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FRG2Q64ET8 278 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 KBTBD2Q8IY47 623 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 AMER2Q8N7J2 671 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ACOT4Q8N9L9 421 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PTCHD1Q96NR3 888 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FRG2BQ96QU4 278 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TMEM109Q9BVC6 243 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SORBS1Q9BX66 1292 aaKnown RBP29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PRDM9Q9NQV7 894 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MKS1Q9NXB0 559 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 C5AR2Q9P296 337 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PPT2Q9UMR5 302 aa29.29■■■□□ 2.28
TRAF3IP1-203ENST00000409739 IGKV3D-11A0A0A0MRZ8 115 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FOXE1O00358 373 aaPredicted RBP29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PLPP1O14494 284 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ETHE1O95571 254 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PRR35P0CG20 571 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MAOAP21397 527 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 HIST1H1TP22492 207 aaPredicted RBP29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PTX3P26022 381 aaPredicted RBP29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 AP5B1Q2VPB7 878 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SFT2D3Q587I9 215 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 COLEC12Q5KU26 742 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FAM219BQ5XKK7 198 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PRICKLE2Q7Z3G6 844 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FAM47BQ8NA70 645 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TMEM52Q8NDY8 209 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 RGMAQ96B86 450 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CCDC126Q96EE4 140 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 APOPT1Q96IL0 206 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MAGEB10Q96LZ2 347 aaPredicted RBP29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ZNF382Q96SR6 550 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CSF3RQ99062 836 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 CENPKQ9BS16 269 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 PSD3Q9NYI0 1048 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ANAPC2Q9UJX6 822 aa29.28■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SERPINA7P05543 415 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 HNRNPFP52597 415 aaKnown RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TTC19Q6DKK2 380 aaPredicted RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ZNF605Q86T29 641 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 HPS6Q86YV9 775 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SRRM1Q8IYB3 904 aaKnown RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TEX19Q8NA77 164 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 RDH11Q8TC12 318 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms