RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 B4GAT1O43505 415 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MPLP40238 635 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MLLT3P42568 568 aaPredicted RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SEPHS1P49903 392 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 CCT8P50990 548 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 KLC1Q07866 573 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 TGM3Q08188 693 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SLC9A5Q14940 896 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 WASHC2DQ5SRD0 308 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 GUSBP11Q6P575 273 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 IKBIPQ70UQ0 350 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 RABEPKQ7Z6M1 372 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 OR4C6Q8NH72 309 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 GAL3ST3Q96A11 431 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ZDHHC12Q96GR4 267 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 TBCDQ9BTW9 1192 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 PAIP1Q9H074 479 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 KCNH6Q9H252 994 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 C1GALT1Q9NS00 363 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 IRAK4Q9NWZ3 460 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 USP22Q9UPT9 525 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MRPS2Q9Y399 296 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 NEUROG3Q9Y4Z2 214 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 A0A096LPI6 279 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF860A6NHJ4 632 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 WASHC1A8K0Z3 465 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 A8MU76 341 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 AGRPO00253 132 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 DUX1O43812 170 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 DNAJA2O60884 412 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SCN2BO60939 215 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 CER1O95813 267 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 NPPAP01160 153 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 C1QCP02747 245 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 DDCP20711 480 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ACTR3P61158 418 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 OLR1P78380 273 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 LIPEQ05469 1076 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 FLOT2Q14254 428 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 KCNAB1Q14722 419 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 HEPACAMQ14CZ8 416 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 NR0B2Q15466 257 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 NDUFAF5Q5TEU4 345 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF621Q6ZSS3 439 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 PRSS41Q7RTY9 318 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MCATQ8IVS2 390 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 CLEC4FQ8N1N0 589 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SRFBP1Q8NEF9 429 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 STMN2Q93045 179 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 EXOSC8Q96B26 276 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 COQ8BQ96D53 544 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 THAP11Q96EK4 314 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 GBP5Q96PP8 586 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ALG2Q9H553 416 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 IKZF5Q9H5V7 419 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 SYNDIG1Q9H7V2 258 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ATAD3AQ9NVI7 634 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 FAM120CQ9NX05 1096 aaKnown RBP11.83□□□□□ -0.52
CHMP3-204ENST00000409727 ABCD2Q9UBJ2 740 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 CD300AQ9UGN4 299 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 EGFL7Q9UHF1 273 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 MAPRE3Q9UPY8 281 aa11.83□□□□□ -0.52
CHMP3-204ENST00000409727 CROCCQ5TZA2 2017 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 PRSS51A0A1B0GVH4 220 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 TLCD2A6NGC4 264 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 KRT36O76013 467 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 SYPP08247 313 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ENGP17813 658 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 IL1RNP18510 177 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 CSF2RBP32927 897 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 RPL3P39023 403 aaKnown RBP11.82□□□□□ -0.52
CHMP3-204ENST00000409727 CFHR1Q03591 330 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 PDE7AQ13946 482 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 CCNIQ14094 377 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 MPEG1Q2M385 716 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ANXA8L1Q5VT79 327 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 C18orf63Q68DL7 685 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ABHD13Q7L211 337 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF655Q8N720 491 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-204ENST00000409727 BHLHE22Q8NFJ8 381 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-204ENST00000409727 OR4A15Q8NGL6 344 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 SLC26A7Q8TE54 656 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 TCTN2Q96GX1 697 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ANKRD27Q96NW4 1050 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 KCTD14Q9BQ13 255 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-204ENST00000409727 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ERVK-11Q9UQG0 969 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 MAN2B2Q9Y2E5 1009 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 ATG4BQ9Y4P1 393 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 SCN3AQ9NY46 2000 aa11.82□□□□□ -0.52
CHMP3-204ENST00000409727 C15orf38-AP3S2A0A0A6YYH1 394 aa11.81□□□□□ -0.52
CHMP3-204ENST00000409727 A0A1W2PR48 441 aa11.81□□□□□ -0.52
CHMP3-204ENST00000409727 URADA6NGE7 173 aa11.81□□□□□ -0.52
CHMP3-204ENST00000409727 YKT6O15498 198 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms